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General transcription and DNA repair factor IIH subunit TFB5

In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape.

AlphaFold DB , UniProt , Accession G4VM34, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 73 aa.

						>G4VM34_SCHMA|G4VM34
MVNVHKGILVKCDPAMKQFLLHLAENLVLGKNFVHTDLDDYHLFIDADILSKLQEKVDGLMESLSFPMNVEND
					

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(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	51.5	Low	75.9	Confident	237 Å²	237	118.6 Å²	118.6	100%	1.167	62%	0.616	S	S	*	*				0	121.2	0	-84	170.9	163.4	0	107.2
2	V	56	Low	76.7	Confident	138 Å²	138	110.1 Å²	110.1	84%	0.836	57%	0.574	S	S	*	*			trans	-98.2	115.9	175.3	-85.5	0	0	0	108	V4	V2-V4 PolarHBondContact O-N 2.7Å
3	N	68.7	Low	77.7	Confident	134 Å²	134	107.8 Å²	107.8	72%	0.717	56%	0.563	S	S	*	*			trans	-88.5	105.7	174.2	-79.2	-4.1	0	0	108.3	H5	N3-H5 PolarHBondContact O-N 2.92Å
4	V	68.8	Low	78.4	Confident	132 Å²	132	104.4 Å²	104.4	80%	0.8	55%	0.55	S	S	*	*			trans	-91	100.9	172.5	-176.5	0	0	0	107.7	V2	V2-V4 PolarHBondContact O-N 2.7Å
5	H	74.4	Confident	78.9	Confident	97 Å²	97	102.2 Å²	102.2	45%	0.449	55%	0.553	S	S	.	*			trans	-98.4	137.4	170.1	-74.8	81.6	0	0	109.6	N3 H35 F44	N3-H5 PolarHBondContact O-N 2.92Å; H5-H35 AromaticContact CD2-CE1 3.65Å; H5-H35 AromaticContact CD2-NE2 3.94Å; H5-H35 AromaticContact CG-CE1 3.74Å; H5-H35 AromaticContact CG-NE2 3.55Å; H5-H35 AromaticContact ND1-CE1 3.99Å; H5-H35 AromaticContact ND1-NE2 3.59Å; H5-H35 AromaticContact NE2-CE1 3.88Å; H5-F44 HydrophobicContact CB-CE1 4.16Å; H5-F44 WeakPolarHBondContact O-CZ 3.41Å
6	K	79.9	Confident	79.2	Confident	199 Å²	199	99.3 Å²	99.3	87%	0.865	54%	0.536	S	S	*	.			trans	-82.8	125.4	171.1	-67.8	-178	-180	-179.6	107.8
7	G	86.1	Confident	79.6	Confident	28 Å²	28	94.5 Å²	94.5	29%	0.289	51%	0.509	S	S	.	.			trans	-163.6	-176.7	-179.3	0	0	0	0	110.5	F44 I45	G7-F44 VanDerWaalsContact CA-CZ 3.42Å; G7-I45 CarbonylContact C-O 3.54Å; G7-I45 VanDerWaalsContact CA-O 3.31Å; G7-I45 WeakPolarHBondContact CA-O 3.44Å
8	I	86.3	Confident	79.9	Confident	51 Å²	51	96 Å²	96	26%	0.262	51%	0.512	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-109.6	129.1	178.2	-63.1	-178.1	0	0	108.2	V10 I45 A47 L50	I8-V10 HydrophobicContact CG2-CG2 4.24Å; I8-I45 HydrophobicContact CB-CG1 4.16Å; I8-I45 PolarHBondContact N-O 2.92Å; I8-I45 PolarHBondContact O-N 3.39Å; I8-A47 HydrophobicContact CD1-CB 3.77Å; I8-A47 HydrophobicContact CG1-CB 3.73Å; I8-L50 HydrophobicContact CD1-CB 3.9Å; I8-L50 HydrophobicContact CD1-CD2 3.53Å; I8-L50 HydrophobicContact CD1-CG 4.28Å; I8-L50 HydrophobicContact CG2-CD2 4.4Å
9	L	87.9	Confident	80.1	Confident	98 Å²	98	93.4 Å²	93.4	51%	0.513	50%	0.496	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-84.8	111.1	170.1	-178	66.2	0	0	108.6	L38 H42	L9-L38 HydrophobicContact CD1-CD1 3.52Å; L9-H42 HydrophobicContact CD1-CB 4.08Å
10	V	86.2	Confident	80.3	Confident	28 Å²	28	89 Å²	89	17%	0.17	47%	0.472	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-93.8	120.6	173.7	178.5	0	0	0	108.4	I8 C12 L20 L43 I45	I8-V10 HydrophobicContact CG2-CG2 4.24Å; V10-C12 HydrophobicContact CG1-CB 4.3Å; V10-L20 HydrophobicContact CG1-CD1 4.26Å; V10-L43 PolarHBondContact N-O 2.86Å; V10-L43 PolarHBondContact O-N 3.25Å; V10-I45 HydrophobicContact CG2-CD1 3.52Å; V10-I45 HydrophobicContact CG2-CG1 3.81Å
11	K	89.4	Confident	80.4	Confident	163 Å²	163	87 Å²	87	71%	0.709	46%	0.462	S	S	*	.	E	Extended strand (participates in β ladder)	trans	-95.9	117.6	169.5	-175.9	178.9	177.5	179.2	108.8	Y41	K11-Y41 VanDerWaalsContact CA-O 3.27Å; K11-Y41 WeakPolarHBondContact CA-O 3.34Å
12	C	85.4	Confident	82	Confident	16 Å²	16	80.4 Å²	80.4	11%	0.108	43%	0.428	C	S	.	.			trans	-143.8	164.9	-179.2	60.5	0	0	0	110.5	V10 M16 Y41	V10-C12 HydrophobicContact CG1-CB 4.3Å; C12-M16 HydrophobicContact CB-CB 3.87Å; C12-M16 HydrophobicContact CB-CG 3.77Å; C12-Y41 PolarHBondContact N-O 3.21Å; C12-Y41 CarbonylContact O-C 3.53Å; C12-Y41 WeakPolarHBondContact O-CA 3.4Å; C12-Y41 WeakPolarHBondContact O-CD1 3.39Å
13	D	89	Confident	83.2	Confident	81 Å²	81	74.1 Å²	74.1	43%	0.433	39%	0.389	S	S	.	.			trans	-73.6	165	173.2	63	-87.4	0	0	111.4	A15 M16 K17	D13-A15 PolarHBondContact O-N 2.88Å; D13-A15 WeakPolarHBondContact OD2-CA 3.48Å; D13-A15 VanDerWaalsContact OD2-CB 3.28Å; D13-A15 WeakPolarHBondContact OD2-CB 3.46Å; D13-A15 PolarHBondContact OD2-N 3.28Å; D13-M16 PolarHBondContact O-N 2.84Å; D13-M16 VanDerWaalsContact O-N 3.16Å; D13-M16 WeakPolarHBondContact OD1-CB 3.13Å; D13-M16 PolarHBondContact OD2-N 2.78Å; D13-K17 PolarHBondContact O-N 2.71Å
14	P	88.5	Confident	83.7	Confident	59 Å²	59	67.9 Å²	67.9	38%	0.383	36%	0.357	S	S	.	.	H	α-helix	trans	-62.7	-29.5	-176	-24	35.7	0	0	113.5	Q18 Y41	P14-Q18 PolarHBondContact O-N 2.79Å; P14-Y41 HydrophobicContact CG-CD1 4.49Å; P14-Y41 HydrophobicContact CG-CE1 3.91Å; P14-Y41 HydrophobicContact CG-CE2 4.36Å
15	A	86.2	Confident	84.3	Confident	72 Å²	72	68.5 Å²	68.5	60%	0.595	35%	0.351	S	S	*	.	H	α-helix	trans	-70.8	-43.5	177.2	0	0	0	0	110.3	D13 Q18 F19	D13-A15 PolarHBondContact O-N 2.88Å; D13-A15 WeakPolarHBondContact OD2-CA 3.48Å; D13-A15 VanDerWaalsContact OD2-CB 3.28Å; D13-A15 WeakPolarHBondContact OD2-CB 3.46Å; D13-A15 PolarHBondContact OD2-N 3.28Å; A15-Q18 PolarHBondContact O-N 3.21Å; A15-F19 PolarHBondContact O-N 3.03Å
16	M	82.9	Confident	84.5	Confident	56 Å²	56	68.1 Å²	68.1	28%	0.276	35%	0.352	S	S	.	.	H	α-helix	trans	-65.5	-38.4	174.2	-170.6	64.2	170.1	0	112.2	C12 D13 Q18 F19 L20 V57	C12-M16 HydrophobicContact CB-CB 3.87Å; C12-M16 HydrophobicContact CB-CG 3.77Å; D13-M16 PolarHBondContact O-N 2.84Å; D13-M16 VanDerWaalsContact O-N 3.16Å; D13-M16 WeakPolarHBondContact OD1-CB 3.13Å; D13-M16 PolarHBondContact OD2-N 2.78Å; M16-Q18 VanDerWaalsContact C-N 3.34Å; M16-Q18 PolarHBondContact O-N 3.33Å; M16-F19 WeakPolarHBondContact O-CB 3.36Å; M16-F19 PolarHBondContact O-N 3.46Å; M16-F19 HydrophobicContact SD-CD1 4.14Å; M16-L20 VanDerWaalsContact O-CG 3.29Å; M16-L20 WeakPolarHBondContact O-CG 3.38Å; M16-L20 PolarHBondContact O-N 3Å; M16-V57 HydrophobicContact CE-CG1 3.61Å; M16-V57 HydrophobicContact CE-CG2 4.48Å
17	K	85.9	Confident	83.9	Confident	18 Å²	18	63.3 Å²	63.3	8%	0.078	34%	0.335	C	S	.	.	H	α-helix	trans	-57.6	-48	172.6	-179.7	-177.9	171.5	-177.2	110.8	D13 F19 L20 L21 D37 D39 D40 L43	D13-K17 PolarHBondContact O-N 2.71Å; K17-F19 VanDerWaalsContact C-N 3.29Å; K17-F19 PolarHBondContact O-N 2.77Å; K17-L20 PolarHBondContact O-N 2.88Å; K17-L21 HydrophobicContact CG-CD1 4.25Å; K17-L21 WeakPolarHBondContact O-CG 3.19Å; K17-L21 PolarHBondContact O-N 2.65Å; K17-D37 IonicContact NZ-OD2 3.42Å; K17-D39 WeakPolarHBondContact CE-O 3.45Å; K17-D39 PolarHBondContact NZ-O 3.44Å; K17-D40 VanDerWaalsContact CD-O 3.3Å; K17-D40 WeakPolarHBondContact CD-O 3.31Å; K17-L43 HydrophobicContact CG-CD1 4.48Å
18	Q	85.8	Confident	82.9	Confident	121 Å²	121	64.6 Å²	64.6	57%	0.565	34%	0.338	S	S	*	.	H	α-helix	trans	-62.7	-39.1	178.4	-168.5	64.8	16.8	0	111.7	P14 A15 M16 L21 H22	P14-Q18 PolarHBondContact O-N 2.79Å; A15-Q18 PolarHBondContact O-N 3.21Å; M16-Q18 VanDerWaalsContact C-N 3.34Å; M16-Q18 PolarHBondContact O-N 3.33Å; Q18-L21 PolarHBondContact O-N 3.42Å; Q18-H22 WeakPolarHBondContact O-CB 3.33Å; Q18-H22 PolarHBondContact O-N 2.81Å
19	F	83.3	Confident	81.9	Confident	47 Å²	47	63.5 Å²	63.5	21%	0.206	33%	0.332	C	S	.	.	H	α-helix	trans	-61.1	-47.8	173.8	-174.5	-108.1	0	0	111.5	A15 M16 K17 L21 H22 L23 V57 L60 L64	A15-F19 PolarHBondContact O-N 3.03Å; M16-F19 WeakPolarHBondContact O-CB 3.36Å; M16-F19 PolarHBondContact O-N 3.46Å; M16-F19 HydrophobicContact SD-CD1 4.14Å; K17-F19 VanDerWaalsContact C-N 3.29Å; K17-F19 PolarHBondContact O-N 2.77Å; F19-L21 PolarHBondContact O-N 3.28Å; F19-H22 WeakPolarHBondContact O-CB 3.39Å; F19-H22 PolarHBondContact O-N 3.22Å; F19-L23 HydrophobicContact CD1-CD1 3.91Å; F19-L23 HydrophobicContact CD1-CG 4.35Å; F19-L23 HydrophobicContact CE1-CD1 3.53Å; F19-L23 HydrophobicContact CE1-CD2 4.5Å; F19-L23 HydrophobicContact CE1-CG 4.14Å; F19-L23 HydrophobicContact CZ-CD1 4.08Å; F19-L23 HydrophobicContact CZ-CD2 4.24Å; F19-L23 HydrophobicContact CZ-CG 4.34Å; F19-L23 WeakPolarHBondContact O-CG 3.49Å; F19-L23 PolarHBondContact O-N 3.45Å; F19-V57 HydrophobicContact CE1-CG1 4.32Å; F19-V57 HydrophobicContact CE1-CG2 4.13Å; F19-L60 HydrophobicContact CZ-CB 3.91Å; F19-L60 HydrophobicContact CZ-CD1 3.95Å; F19-L64 HydrophobicContact CE2-CD1 4.06Å; F19-L64 HydrophobicContact CZ-CD1 4.43Å
20	L	83	Confident	80.9	Confident	4 Å²	4	62 Å²	62	2%	0.021	34%	0.341	C	S	.	.	H	α-helix	trans	-61.1	-42	177.1	-69.7	178.5	0	0	112.6	V10 M16 K17 H22 L23 A24 F33 L43 L53 V57	V10-L20 HydrophobicContact CG1-CD1 4.26Å; M16-L20 VanDerWaalsContact O-CG 3.29Å; M16-L20 WeakPolarHBondContact O-CG 3.38Å; M16-L20 PolarHBondContact O-N 3Å; K17-L20 PolarHBondContact O-N 2.88Å; L20-H22 VanDerWaalsContact C-N 3.33Å; L20-L23 PolarHBondContact O-N 3.07Å; L20-A24 WeakPolarHBondContact O-CB 3.28Å; L20-A24 PolarHBondContact O-N 3.25Å; L20-F33 WeakPolarHBondContact O-CZ 3.41Å; L20-L43 HydrophobicContact CB-CD2 3.85Å; L20-L43 HydrophobicContact CD1-CD2 3.82Å; L20-L53 HydrophobicContact CD2-CD1 3.83Å; L20-L53 HydrophobicContact CD2-CD2 3.8Å; L20-L53 HydrophobicContact CD2-CG 4.05Å; L20-V57 HydrophobicContact CD2-CG2 4.15Å
21	L	84.1	Confident	80.1	Confident	48 Å²	48	64.6 Å²	64.6	25%	0.251	35%	0.35	S	S	.	.	H	α-helix	trans	-60.9	-44.6	174.1	-73.5	170.9	0	0	111	K17 Q18 F19 L23 A24 E25 V34 L43	K17-L21 HydrophobicContact CG-CD1 4.25Å; K17-L21 WeakPolarHBondContact O-CG 3.19Å; K17-L21 PolarHBondContact O-N 2.65Å; Q18-L21 PolarHBondContact O-N 3.42Å; F19-L21 PolarHBondContact O-N 3.28Å; L21-L23 VanDerWaalsContact C-N 3.31Å; L21-L23 PolarHBondContact O-N 3Å; L21-A24 WeakPolarHBondContact O-CB 3.23Å; L21-A24 PolarHBondContact O-N 3.21Å; L21-A24 VanDerWaalsContact O-N 3.12Å; L21-E25 WeakPolarHBondContact O-CG 3.41Å; L21-E25 PolarHBondContact O-N 2.91Å; L21-V34 HydrophobicContact CD2-CG1 4.2Å; L21-V34 HydrophobicContact CD2-CG2 4.38Å; L21-L43 HydrophobicContact CD2-CD1 4.49Å
22	H	83.4	Confident	79.6	Confident	98 Å²	98	61.5 Å²	61.5	45%	0.454	34%	0.341	S	S	.	.	H	α-helix	trans	-62	-38.9	176.8	-167	61.2	0	0	112.2	Q18 F19 L20 A24 E25 N26	Q18-H22 WeakPolarHBondContact O-CB 3.33Å; Q18-H22 PolarHBondContact O-N 2.81Å; F19-H22 WeakPolarHBondContact O-CB 3.39Å; F19-H22 PolarHBondContact O-N 3.22Å; L20-H22 VanDerWaalsContact C-N 3.33Å; H22-A24 VanDerWaalsContact C-N 3.34Å; H22-E25 PolarHBondContact O-N 3.28Å; H22-N26 PolarHBondContact CD2-ND2 2.8Å; H22-N26 PolarHBondContact CE1-ND2 2.99Å; H22-N26 VanDerWaalsContact CE1-ND2 3.27Å; H22-N26 PolarHBondContact NE2-ND2 3.48Å; H22-N26 WeakPolarHBondContact O-CB 3.36Å; H22-N26 PolarHBondContact O-N 3.27Å; H22-N26 PolarHBondContact O-ND2 2.97Å
23	L	81.2	Confident	79.5	Confident	6 Å²	6	60.8 Å²	60.8	3%	0.031	34%	0.336	C	S	.	.	H	α-helix	trans	-66.2	-37.3	174	-65.9	-177.5	0	0	112.9	F19 L20 L21 L27 V28 F33 L53 V57 L60	F19-L23 HydrophobicContact CD1-CD1 3.91Å; F19-L23 HydrophobicContact CD1-CG 4.35Å; F19-L23 HydrophobicContact CE1-CD1 3.53Å; F19-L23 HydrophobicContact CE1-CD2 4.5Å; F19-L23 HydrophobicContact CE1-CG 4.14Å; F19-L23 HydrophobicContact CZ-CD1 4.08Å; F19-L23 HydrophobicContact CZ-CD2 4.24Å; F19-L23 HydrophobicContact CZ-CG 4.34Å; F19-L23 WeakPolarHBondContact O-CG 3.49Å; F19-L23 PolarHBondContact O-N 3.45Å; L20-L23 PolarHBondContact O-N 3.07Å; L21-L23 VanDerWaalsContact C-N 3.31Å; L21-L23 PolarHBondContact O-N 3Å; L23-L27 PolarHBondContact O-N 3.45Å; L23-V28 HydrophobicContact CD2-CG2 4.16Å; L23-V28 PolarHBondContact O-N 2.96Å; L23-F33 HydrophobicContact CB-CE1 4.29Å; L23-F33 HydrophobicContact CB-CZ 4.25Å; L23-L53 HydrophobicContact CD1-CD1 4.23Å; L23-V57 HydrophobicContact CD1-CG2 3.68Å; L23-L60 HydrophobicContact CD1-CD1 4.24Å; L23-L60 HydrophobicContact CD2-CD1 3.17Å; L23-L60 HydrophobicContact CG-CD1 4.32Å
24	A	79.9	Confident	79.3	Confident	4 Å²	4	57.9 Å²	57.9	3%	0.033	32%	0.321	C	S	.	.	H	α-helix	trans	-67.1	-42.3	177.2	0	0	0	0	111.5	L20 L21 H22 L27 N32 F33 V34	L20-A24 WeakPolarHBondContact O-CB 3.28Å; L20-A24 PolarHBondContact O-N 3.25Å; L21-A24 WeakPolarHBondContact O-CB 3.23Å; L21-A24 PolarHBondContact O-N 3.21Å; L21-A24 VanDerWaalsContact O-N 3.12Å; H22-A24 VanDerWaalsContact C-N 3.34Å; A24-L27 PolarHBondContact O-N 2.82Å; A24-N32 WeakPolarHBondContact CB-OD1 3.42Å; A24-F33 VanDerWaalsContact CA-CE1 3.48Å; A24-F33 HydrophobicContact CB-CD1 4.06Å; A24-F33 HydrophobicContact CB-CE1 3.61Å; A24-F33 HydrophobicContact CB-CE2 4.37Å; A24-F33 HydrophobicContact CB-CZ 3.78Å; A24-V34 HydrophobicContact CB-CG2 3.77Å
25	E	81.5	Confident	79	Confident	144 Å²	144	59.1 Å²	59.1	67%	0.673	32%	0.322	S	S	*	.	H	α-helix	trans	-65.2	-42.6	176	-74.5	-176.3	130.5	0	112.5	L21 H22 L27	L21-E25 WeakPolarHBondContact O-CG 3.41Å; L21-E25 PolarHBondContact O-N 2.91Å; H22-E25 PolarHBondContact O-N 3.28Å; E25-L27 PolarHBondContact O-N 3.47Å
26	N	77.9	Confident	78.9	Confident	89 Å²	89	58.4 Å²	58.4	48%	0.476	31%	0.31	S	S	.	.	T	Hydrogen-bonded Turn	trans	-70.1	-0.7	177.6	-78	-59.9	0	0	113.3	H22 V28	H22-N26 PolarHBondContact CD2-ND2 2.8Å; H22-N26 PolarHBondContact CE1-ND2 2.99Å; H22-N26 VanDerWaalsContact CE1-ND2 3.27Å; H22-N26 PolarHBondContact NE2-ND2 3.48Å; H22-N26 WeakPolarHBondContact O-CB 3.36Å; H22-N26 PolarHBondContact O-N 3.27Å; H22-N26 PolarHBondContact O-ND2 2.97Å; N26-V28 HydrophobicContact CB-CG2 3.6Å; N26-V28 PolarHBondContact O-N 3Å
27	L	69	Low	79	Confident	98 Å²	98	60.5 Å²	60.5	51%	0.513	32%	0.322	S	S	.	.	T	Hydrogen-bonded Turn	trans	48.5	35.1	-178.7	-68.6	162.4	0	0	111.9	L23 A24 E25 L29 G30	L23-L27 PolarHBondContact O-N 3.45Å; A24-L27 PolarHBondContact O-N 2.82Å; E25-L27 PolarHBondContact O-N 3.47Å; L27-L29 PolarHBondContact O-N 3.39Å; L27-G30 WeakPolarHBondContact O-CA 3.43Å; L27-G30 PolarHBondContact O-N 3.3Å
28	V	63.9	Low	78.9	Confident	56 Å²	56	63.9 Å²	63.9	34%	0.339	34%	0.341	S	S	.	.	T	Hydrogen-bonded Turn	trans	-58.5	-23.9	-176.4	-177.7	0	0	0	111.2	L23 N26 K56	L23-V28 HydrophobicContact CD2-CG2 4.16Å; L23-V28 PolarHBondContact O-N 2.96Å; N26-V28 HydrophobicContact CB-CG2 3.6Å; N26-V28 PolarHBondContact O-N 3Å; V28-K56 HydrophobicContact CG1-CD 4Å; V28-K56 HydrophobicContact CG1-CG 4.32Å
29	L	65.3	Low	78.9	Confident	27 Å²	27	62.8 Å²	62.8	14%	0.141	34%	0.339	C	S	.	.	T	Hydrogen-bonded Turn	trans	-104.8	6.5	180	-69.5	147.2	0	0	113.4	L27 K31 F33 I49 K52 L53 K56	L27-L29 PolarHBondContact O-N 3.39Å; L29-K31 PolarHBondContact O-N 3.43Å; L29-F33 HydrophobicContact CD1-CD1 3.6Å; L29-F33 HydrophobicContact CD1-CE1 3.57Å; L29-F33 HydrophobicContact CD1-CZ 4.47Å; L29-I49 HydrophobicContact CB-CD1 3.85Å; L29-I49 HydrophobicContact CB-CG1 4.29Å; L29-I49 HydrophobicContact CD1-CD1 4.45Å; L29-I49 HydrophobicContact CD1-CG1 4.03Å; L29-I49 HydrophobicContact CD2-CD1 3.93Å; L29-I49 HydrophobicContact CD2-CG1 4.19Å; L29-I49 HydrophobicContact CG-CD1 4.3Å; L29-I49 HydrophobicContact CG-CG1 4.4Å; L29-K52 HydrophobicContact CD2-CB 3.29Å; L29-K52 HydrophobicContact CD2-CD 4.31Å; L29-K52 HydrophobicContact CD2-CG 4.42Å; L29-L53 HydrophobicContact CD1-CB 4.33Å; L29-L53 HydrophobicContact CD1-CD1 3.77Å; L29-K56 HydrophobicContact CD2-CG 4.01Å; L29-K56 HydrophobicContact CG-CG 4.4Å
30	G	66.7	Low	78.9	Confident	68 Å²	68	65.6 Å²	65.6	70%	0.701	36%	0.356	S	S	*	.	S	Bend	trans	76.1	-4.8	-179.8	0	0	0	0	115.4	L27	L27-G30 WeakPolarHBondContact O-CA 3.43Å; L27-G30 PolarHBondContact O-N 3.3Å
31	K	70.9	Confident	79.2	Confident	82 Å²	82	71.3 Å²	71.3	36%	0.357	38%	0.378	S	S	.	.	S	Bend	trans	-148	146.7	174.9	58.1	-179.5	176.7	179	110.3	L29 F33 D48 I49	L29-K31 PolarHBondContact O-N 3.43Å; K31-F33 PolarHBondContact O-N 3.43Å; K31-D48 IonicContact NZ-OD1 3.06Å; K31-D48 PolarHBondContact NZ-OD1 3.23Å; K31-I49 HydrophobicContact CG-CD1 4.43Å
32	N	77.8	Confident	79.4	Confident	98 Å²	98	71.6 Å²	71.6	52%	0.524	38%	0.378	S	S	.	.			trans	-65.2	122.6	165.1	-174.9	1.9	0	0	107.5	A24 V34	A24-N32 WeakPolarHBondContact CB-OD1 3.42Å; N32-V34 PolarHBondContact OD1-N 2.94Å
33	F	83.2	Confident	79.6	Confident	0 Å²	0	67 Å²	67	0%	0	36%	0.357	C	S	.	.			trans	-103.7	-6.7	-177	60.5	-96.9	0	0	113.3	L20 L23 A24 L29 K31 I45 D46 I49 L53	L20-F33 WeakPolarHBondContact O-CZ 3.41Å; L23-F33 HydrophobicContact CB-CE1 4.29Å; L23-F33 HydrophobicContact CB-CZ 4.25Å; A24-F33 VanDerWaalsContact CA-CE1 3.48Å; A24-F33 HydrophobicContact CB-CD1 4.06Å; A24-F33 HydrophobicContact CB-CE1 3.61Å; A24-F33 HydrophobicContact CB-CE2 4.37Å; A24-F33 HydrophobicContact CB-CZ 3.78Å; L29-F33 HydrophobicContact CD1-CD1 3.6Å; L29-F33 HydrophobicContact CD1-CE1 3.57Å; L29-F33 HydrophobicContact CD1-CZ 4.47Å; K31-F33 PolarHBondContact O-N 3.43Å; F33-I45 HydrophobicContact CD2-CB 4.21Å; F33-I45 HydrophobicContact CD2-CG2 3.81Å; F33-I45 HydrophobicContact CE2-CG2 4.22Å; F33-I45 WeakPolarHBondContact O-CA 3.11Å; F33-I45 WeakPolarHBondContact O-CB 3.25Å; F33-D46 PolarHBondContact O-N 2.86Å; F33-I49 HydrophobicContact CB-CB 3.95Å; F33-I49 HydrophobicContact CB-CG1 3.75Å; F33-I49 HydrophobicContact CB-CG2 3.44Å; F33-I49 VanDerWaalsContact CB-CG2 3.44Å; F33-I49 HydrophobicContact CD1-CG1 4.44Å; F33-I49 HydrophobicContact CD2-CG2 4.17Å; F33-I49 HydrophobicContact CG-CG1 4.2Å; F33-I49 HydrophobicContact CG-CG2 3.98Å; F33-L53 HydrophobicContact CD2-CD2 4.22Å; F33-L53 HydrophobicContact CE1-CD1 3.84Å; F33-L53 HydrophobicContact CE2-CD1 3.79Å; F33-L53 HydrophobicContact CE2-CD2 3.75Å; F33-L53 HydrophobicContact CE2-CG 4.4Å; F33-L53 HydrophobicContact CZ-CD1 3.38Å; F33-L53 HydrophobicContact CZ-CD2 4.26Å; F33-L53 HydrophobicContact CZ-CG 4.44Å
34	V	84.5	Confident	79.9	Confident	21 Å²	21	68.6 Å²	68.6	13%	0.127	36%	0.363	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-86.1	112.7	176.7	179.5	0	0	0	108.1	L21 A24 N32 L43 I45	L21-V34 HydrophobicContact CD2-CG1 4.2Å; L21-V34 HydrophobicContact CD2-CG2 4.38Å; A24-V34 HydrophobicContact CB-CG2 3.77Å; N32-V34 PolarHBondContact OD1-N 2.94Å; V34-L43 HydrophobicContact CG1-CD1 3.51Å; V34-L43 HydrophobicContact CG1-CD2 4.4Å; V34-L43 HydrophobicContact CG1-CG 3.99Å; V34-L43 HydrophobicContact CG2-CD1 4.39Å; V34-L43 HydrophobicContact CG2-CD2 3.8Å; V34-L43 HydrophobicContact CG2-CG 4.26Å; V34-I45 HydrophobicContact CG2-CG2 4.4Å
35	H	83.6	Confident	80.3	Confident	84 Å²	84	68.4 Å²	68.4	39%	0.389	36%	0.362	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-86.5	-45.5	179.3	-173.4	82.6	0	0	111.4	H5 F44	H5-H35 AromaticContact CD2-CE1 3.65Å; H5-H35 AromaticContact CD2-NE2 3.94Å; H5-H35 AromaticContact CG-CE1 3.74Å; H5-H35 AromaticContact CG-NE2 3.55Å; H5-H35 AromaticContact ND1-CE1 3.99Å; H5-H35 AromaticContact ND1-NE2 3.59Å; H5-H35 AromaticContact NE2-CE1 3.88Å; H35-F44 HydrophobicContact CB-CD1 3.97Å; H35-F44 AromaticContact CD2-CD1 3.88Å; H35-F44 PolarHBondContact N-O 3.23Å
36	T	83.3	Confident	80.4	Confident	58 Å²	58	64.4 Å²	64.4	36%	0.356	35%	0.345	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-153.9	131.3	-179.9	-54.2	0	0	0	109.6	L38 F44	T36-L38 HydrophobicContact CG2-CD2 4.1Å; T36-F44 PolarHBondContact N-O 2.91Å; T36-F44 WeakPolarHBondContact O-CA 3.39Å; T36-F44 VanDerWaalsContact O-CB 3.25Å; T36-F44 WeakPolarHBondContact O-CB 3.29Å; T36-F44 PolarHBondContact O-N 3.12Å
37	D	84.2	Confident	80.7	Confident	99 Å²	99	62.8 Å²	62.8	53%	0.529	34%	0.344	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-82.8	123.5	163.2	70.5	-63.9	0	0	108.7	K17 L43	K17-D37 IonicContact NZ-OD2 3.42Å; D37-L43 HydrophobicContact CB-CD1 4.05Å
38	L	84.8	Confident	81.4	Confident	90 Å²	90	63.5 Å²	63.5	47%	0.471	35%	0.348	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-92.6	-41.8	-178.5	-66	171.9	0	0	110.5	L9 T36 H42 F44	L9-L38 HydrophobicContact CD1-CD1 3.52Å; T36-L38 HydrophobicContact CG2-CD2 4.1Å; L38-H42 HydrophobicContact CB-CB 3.95Å; L38-H42 PolarHBondContact N-O 3.17Å; L38-F44 HydrophobicContact CD1-CB 4.48Å
39	D	84.7	Confident	82.2	Confident	97 Å²	97	60.8 Å²	60.8	52%	0.519	33%	0.332	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-156.3	-180	179.2	-64.6	-70.8	0	0	110	K17 Y41 H42	K17-D39 WeakPolarHBondContact CE-O 3.45Å; K17-D39 PolarHBondContact NZ-O 3.44Å; D39-Y41 PolarHBondContact O-N 2.8Å; D39-Y41 VanDerWaalsContact O-N 3.14Å; D39-H42 HydrophobicContact CB-CB 4.32Å; D39-H42 PolarHBondContact N-O 3.02Å; D39-H42 PolarHBondContact O-N 3.47Å; D39-H42 IonicContact OD2-ND1 3.67Å; D39-H42 PolarHBondContact OD2-ND1 2.82Å
40	D	84.3	Confident	83	Confident	106 Å²	106	61.6 Å²	61.6	57%	0.567	34%	0.336	S	S	*	.	T	Hydrogen-bonded Turn	trans	-58.7	-22.4	173.1	-68	-51.5	0	0	114.3	K17	K17-D40 VanDerWaalsContact CD-O 3.3Å; K17-D40 WeakPolarHBondContact CD-O 3.31Å
41	Y	88.5	Confident	83.7	Confident	125 Å²	125	62 Å²	62	49%	0.49	33%	0.329	S	S	.	.	T	Hydrogen-bonded Turn	trans	-113.2	-3.5	-177.5	-64.1	-90.2	0	0	114.2	K11 C12 P14 D39	K11-Y41 VanDerWaalsContact CA-O 3.27Å; K11-Y41 WeakPolarHBondContact CA-O 3.34Å; C12-Y41 PolarHBondContact N-O 3.21Å; C12-Y41 CarbonylContact O-C 3.53Å; C12-Y41 WeakPolarHBondContact O-CA 3.4Å; C12-Y41 WeakPolarHBondContact O-CD1 3.39Å; P14-Y41 HydrophobicContact CG-CD1 4.49Å; P14-Y41 HydrophobicContact CG-CE1 3.91Å; P14-Y41 HydrophobicContact CG-CE2 4.36Å; D39-Y41 PolarHBondContact O-N 2.8Å; D39-Y41 VanDerWaalsContact O-N 3.14Å
42	H	88.3	Confident	84.3	Confident	54 Å²	54	63.4 Å²	63.4	25%	0.25	33%	0.334	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-130.8	118.7	-170.8	-63.5	114.3	0	0	110.6	L9 L38 D39	L9-H42 HydrophobicContact CD1-CB 4.08Å; L38-H42 HydrophobicContact CB-CB 3.95Å; L38-H42 PolarHBondContact N-O 3.17Å; D39-H42 HydrophobicContact CB-CB 4.32Å; D39-H42 PolarHBondContact N-O 3.02Å; D39-H42 PolarHBondContact O-N 3.47Å; D39-H42 IonicContact OD2-ND1 3.67Å; D39-H42 PolarHBondContact OD2-ND1 2.82Å
43	L	87.4	Confident	84.5	Confident	0 Å²	0	59.1 Å²	59.1	0%	0	31%	0.311	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-121.2	129.5	178.5	-161.4	69.2	0	0	109.6	V10 K17 L20 L21 V34 D37 I45	V10-L43 PolarHBondContact N-O 2.86Å; V10-L43 PolarHBondContact O-N 3.25Å; K17-L43 HydrophobicContact CG-CD1 4.48Å; L20-L43 HydrophobicContact CB-CD2 3.85Å; L20-L43 HydrophobicContact CD1-CD2 3.82Å; L21-L43 HydrophobicContact CD2-CD1 4.49Å; V34-L43 HydrophobicContact CG1-CD1 3.51Å; V34-L43 HydrophobicContact CG1-CD2 4.4Å; V34-L43 HydrophobicContact CG1-CG 3.99Å; V34-L43 HydrophobicContact CG2-CD1 4.39Å; V34-L43 HydrophobicContact CG2-CD2 3.8Å; V34-L43 HydrophobicContact CG2-CG 4.26Å; D37-L43 HydrophobicContact CB-CD1 4.05Å; L43-I45 HydrophobicContact CD2-CG2 4.03Å; L43-I45 HydrophobicContact CG-CG2 4.09Å
44	F	88.5	Confident	84.5	Confident	40 Å²	40	64.3 Å²	64.3	18%	0.175	34%	0.336	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-97.9	118.5	176.3	-162.9	-111.4	0	0	110.1	H5 G7 H35 T36 L38	H5-F44 HydrophobicContact CB-CE1 4.16Å; H5-F44 WeakPolarHBondContact O-CZ 3.41Å; G7-F44 VanDerWaalsContact CA-CZ 3.42Å; H35-F44 HydrophobicContact CB-CD1 3.97Å; H35-F44 AromaticContact CD2-CD1 3.88Å; H35-F44 PolarHBondContact N-O 3.23Å; T36-F44 PolarHBondContact N-O 2.91Å; T36-F44 WeakPolarHBondContact O-CA 3.39Å; T36-F44 VanDerWaalsContact O-CB 3.25Å; T36-F44 WeakPolarHBondContact O-CB 3.29Å; T36-F44 PolarHBondContact O-N 3.12Å; L38-F44 HydrophobicContact CD1-CB 4.48Å
45	I	87.2	Confident	84.5	Confident	0 Å²	0	70.1 Å²	70.1	0%	0	36%	0.362	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-125.4	161.9	-176.4	69	169.1	0	0	112.2	G7 I8 V10 F33 V34 L43 I49 L50 L53	G7-I45 CarbonylContact C-O 3.54Å; G7-I45 VanDerWaalsContact CA-O 3.31Å; G7-I45 WeakPolarHBondContact CA-O 3.44Å; I8-I45 HydrophobicContact CB-CG1 4.16Å; I8-I45 PolarHBondContact N-O 2.92Å; I8-I45 PolarHBondContact O-N 3.39Å; V10-I45 HydrophobicContact CG2-CD1 3.52Å; V10-I45 HydrophobicContact CG2-CG1 3.81Å; F33-I45 HydrophobicContact CD2-CB 4.21Å; F33-I45 HydrophobicContact CD2-CG2 3.81Å; F33-I45 HydrophobicContact CE2-CG2 4.22Å; F33-I45 WeakPolarHBondContact O-CA 3.11Å; F33-I45 WeakPolarHBondContact O-CB 3.25Å; V34-I45 HydrophobicContact CG2-CG2 4.4Å; L43-I45 HydrophobicContact CD2-CG2 4.03Å; L43-I45 HydrophobicContact CG-CG2 4.09Å; I45-I49 HydrophobicContact CD1-CG2 4.22Å; I45-L50 HydrophobicContact CD1-CD1 4.02Å; I45-L53 HydrophobicContact CD1-CD2 3.81Å
46	D	85.1	Confident	84.3	Confident	61 Å²	61	70.9 Å²	70.9	33%	0.326	36%	0.364	S	S	.	.			trans	-67.4	135.8	172.7	-79.7	-58.2	0	0	112.3	F33 D48 I49	F33-D46 PolarHBondContact O-N 2.86Å; D46-D48 PolarHBondContact O-N 3.28Å; D46-I49 HydrophobicContact CB-CG2 4.34Å; D46-I49 WeakPolarHBondContact O-CG2 3.28Å; D46-I49 PolarHBondContact O-N 3.29Å
47	A	83.7	Confident	84.1	Confident	54 Å²	54	68.6 Å²	68.6	45%	0.446	35%	0.35	S	S	.	.	G	3₁₀ helix	trans	-62.7	-32.3	-179.7	0	0	0	0	113.5	I8 I49 L50	I8-A47 HydrophobicContact CD1-CB 3.77Å; I8-A47 HydrophobicContact CG1-CB 3.73Å; A47-I49 PolarHBondContact O-N 3.01Å; A47-L50 PolarHBondContact O-N 3.04Å
48	D	83	Confident	84	Confident	113 Å²	113	68.4 Å²	68.4	60%	0.604	35%	0.349	S	S	*	.	G	3₁₀ helix	trans	-66.4	-25	-179.2	-176.9	-108	0	0	113.1	K31 D46	K31-D48 IonicContact NZ-OD1 3.06Å; K31-D48 PolarHBondContact NZ-OD1 3.23Å; D46-D48 PolarHBondContact O-N 3.28Å
49	I	81.2	Confident	83.8	Confident	0 Å²	0	65.9 Å²	65.9	0%	0	34%	0.344	C	S	.	.	G	3₁₀ helix	trans	-91.1	-17.2	-175.7	-152.5	68.1	0	0	113.2	L29 K31 F33 I45 D46 A47 S51 K52 L53	L29-I49 HydrophobicContact CB-CD1 3.85Å; L29-I49 HydrophobicContact CB-CG1 4.29Å; L29-I49 HydrophobicContact CD1-CD1 4.45Å; L29-I49 HydrophobicContact CD1-CG1 4.03Å; L29-I49 HydrophobicContact CD2-CD1 3.93Å; L29-I49 HydrophobicContact CD2-CG1 4.19Å; L29-I49 HydrophobicContact CG-CD1 4.3Å; L29-I49 HydrophobicContact CG-CG1 4.4Å; K31-I49 HydrophobicContact CG-CD1 4.43Å; F33-I49 HydrophobicContact CB-CB 3.95Å; F33-I49 HydrophobicContact CB-CG1 3.75Å; F33-I49 HydrophobicContact CB-CG2 3.44Å; F33-I49 VanDerWaalsContact CB-CG2 3.44Å; F33-I49 HydrophobicContact CD1-CG1 4.44Å; F33-I49 HydrophobicContact CD2-CG2 4.17Å; F33-I49 HydrophobicContact CG-CG1 4.2Å; F33-I49 HydrophobicContact CG-CG2 3.98Å; I45-I49 HydrophobicContact CD1-CG2 4.22Å; D46-I49 HydrophobicContact CB-CG2 4.34Å; D46-I49 WeakPolarHBondContact O-CG2 3.28Å; D46-I49 PolarHBondContact O-N 3.29Å; A47-I49 PolarHBondContact O-N 3.01Å; I49-S51 VanDerWaalsContact C-N 3.32Å; I49-S51 PolarHBondContact O-N 2.88Å; I49-K52 HydrophobicContact CD1-CB 4.38Å; I49-K52 HydrophobicContact CD1-CD 4.11Å; I49-K52 PolarHBondContact O-N 3.16Å; I49-K52 VanDerWaalsContact O-N 3.07Å; I49-L53 WeakPolarHBondContact O-CB 3.43Å; I49-L53 PolarHBondContact O-N 3.02Å
50	L	81.1	Confident	83.5	Confident	43 Å²	43	63.9 Å²	63.9	23%	0.225	33%	0.334	C	S	.	.	H	α-helix	trans	-57.7	-45.7	-168.5	177.8	70.1	0	0	111.6	I8 I45 A47 K52 L53 Q54	I8-L50 HydrophobicContact CD1-CB 3.9Å; I8-L50 HydrophobicContact CD1-CD2 3.53Å; I8-L50 HydrophobicContact CD1-CG 4.28Å; I8-L50 HydrophobicContact CG2-CD2 4.4Å; I45-L50 HydrophobicContact CD1-CD1 4.02Å; A47-L50 PolarHBondContact O-N 3.04Å; L50-K52 PolarHBondContact O-N 3.27Å; L50-L53 PolarHBondContact O-N 3.24Å; L50-Q54 HydrophobicContact CD1-CG 4.41Å; L50-Q54 WeakPolarHBondContact O-CG 3.36Å; L50-Q54 PolarHBondContact O-N 3.46Å
51	S	83.4	Confident	83	Confident	78 Å²	78	62.9 Å²	62.9	55%	0.545	33%	0.326	S	S	.	.	H	α-helix	trans	-59.8	-45.7	178.3	-58.3	0	0	0	111.9	I49 L53 Q54 E55	I49-S51 VanDerWaalsContact C-N 3.32Å; I49-S51 PolarHBondContact O-N 2.88Å; S51-L53 VanDerWaalsContact C-N 3.34Å; S51-L53 PolarHBondContact O-N 2.86Å; S51-Q54 PolarHBondContact O-N 2.91Å; S51-E55 PolarHBondContact O-N 3.42Å; S51-E55 VanDerWaalsContact O-N 3.14Å
52	K	82.9	Confident	82.5	Confident	110 Å²	110	64.4 Å²	64.4	48%	0.478	34%	0.338	S	S	.	.	H	α-helix	trans	-68.6	-36.1	178.8	-64	-179	173.7	174.5	111.9	L29 I49 L50 K56	L29-K52 HydrophobicContact CD2-CB 3.29Å; L29-K52 HydrophobicContact CD2-CD 4.31Å; L29-K52 HydrophobicContact CD2-CG 4.42Å; I49-K52 HydrophobicContact CD1-CB 4.38Å; I49-K52 HydrophobicContact CD1-CD 4.11Å; I49-K52 PolarHBondContact O-N 3.16Å; I49-K52 VanDerWaalsContact O-N 3.07Å; L50-K52 PolarHBondContact O-N 3.27Å; K52-K56 WeakPolarHBondContact O-CB 3.3Å; K52-K56 VanDerWaalsContact O-CG 3.29Å; K52-K56 WeakPolarHBondContact O-CG 3.41Å; K52-K56 PolarHBondContact O-N 2.89Å
53	L	82.1	Confident	81.9	Confident	8 Å²	8	65.8 Å²	65.8	4%	0.042	35%	0.354	C	S	.	.	H	α-helix	trans	-64.1	-46	177.2	-178.3	66.1	0	0	110.1	L20 L23 L29 F33 I45 I49 L50 S51 K56 V57	L20-L53 HydrophobicContact CD2-CD1 3.83Å; L20-L53 HydrophobicContact CD2-CD2 3.8Å; L20-L53 HydrophobicContact CD2-CG 4.05Å; L23-L53 HydrophobicContact CD1-CD1 4.23Å; L29-L53 HydrophobicContact CD1-CB 4.33Å; L29-L53 HydrophobicContact CD1-CD1 3.77Å; F33-L53 HydrophobicContact CD2-CD2 4.22Å; F33-L53 HydrophobicContact CE1-CD1 3.84Å; F33-L53 HydrophobicContact CE2-CD1 3.79Å; F33-L53 HydrophobicContact CE2-CD2 3.75Å; F33-L53 HydrophobicContact CE2-CG 4.4Å; F33-L53 HydrophobicContact CZ-CD1 3.38Å; F33-L53 HydrophobicContact CZ-CD2 4.26Å; F33-L53 HydrophobicContact CZ-CG 4.44Å; I45-L53 HydrophobicContact CD1-CD2 3.81Å; I49-L53 WeakPolarHBondContact O-CB 3.43Å; I49-L53 PolarHBondContact O-N 3.02Å; L50-L53 PolarHBondContact O-N 3.24Å; S51-L53 VanDerWaalsContact C-N 3.34Å; S51-L53 PolarHBondContact O-N 2.86Å; L53-K56 PolarHBondContact O-N 3.05Å; L53-V57 HydrophobicContact CD1-CG2 4.04Å; L53-V57 HydrophobicContact CG-CG2 4.14Å; L53-V57 VanDerWaalsContact O-CB 3.25Å; L53-V57 WeakPolarHBondContact O-CB 3.29Å; L53-V57 WeakPolarHBondContact O-CG2 3.4Å; L53-V57 PolarHBondContact O-N 3.5Å
54	Q	82	Confident	81	Confident	109 Å²	109	71.2 Å²	71.2	51%	0.509	38%	0.382	S	S	.	.	H	α-helix	trans	-57.6	-52.2	175.4	-75.5	178.2	-24.2	0	111.3	L50 S51 K56 V57 D58	L50-Q54 HydrophobicContact CD1-CG 4.41Å; L50-Q54 WeakPolarHBondContact O-CG 3.36Å; L50-Q54 PolarHBondContact O-N 3.46Å; S51-Q54 PolarHBondContact O-N 2.91Å; Q54-K56 VanDerWaalsContact C-N 3.28Å; Q54-K56 PolarHBondContact O-N 3.14Å; Q54-V57 PolarHBondContact O-N 3.26Å; Q54-D58 WeakPolarHBondContact O-CB 3.5Å; Q54-D58 VanDerWaalsContact O-CG 3.26Å; Q54-D58 PolarHBondContact O-N 2.78Å
55	E	84.6	Confident	79.8	Confident	143 Å²	143	73.2 Å²	73.2	67%	0.668	40%	0.401	S	S	*	.	H	α-helix	trans	-57.3	-39.8	177.6	-71.9	176.5	-175.9	0	113	S51 G59	S51-E55 PolarHBondContact O-N 3.42Å; S51-E55 VanDerWaalsContact O-N 3.14Å; E55-G59 PolarHBondContact O-N 3.45Å
56	K	79.7	Confident	78.4	Confident	101 Å²	101	81 Å²	81	44%	0.439	44%	0.435	S	S	.	.	H	α-helix	trans	-72.6	-41	178.6	-74.4	-63.3	-174.6	-176.5	112.8	V28 L29 K52 L53 Q54 D58 G59 L60	V28-K56 HydrophobicContact CG1-CD 4Å; V28-K56 HydrophobicContact CG1-CG 4.32Å; L29-K56 HydrophobicContact CD2-CG 4.01Å; L29-K56 HydrophobicContact CG-CG 4.4Å; K52-K56 WeakPolarHBondContact O-CB 3.3Å; K52-K56 VanDerWaalsContact O-CG 3.29Å; K52-K56 WeakPolarHBondContact O-CG 3.41Å; K52-K56 PolarHBondContact O-N 2.89Å; L53-K56 PolarHBondContact O-N 3.05Å; Q54-K56 VanDerWaalsContact C-N 3.28Å; Q54-K56 PolarHBondContact O-N 3.14Å; K56-D58 VanDerWaalsContact C-N 3.34Å; K56-G59 PolarHBondContact O-N 2.86Å; K56-L60 WeakPolarHBondContact O-CB 3.34Å; K56-L60 WeakPolarHBondContact O-CG 3.33Å; K56-L60 PolarHBondContact O-N 3.28Å
57	V	78.7	Confident	77.2	Confident	10 Å²	10	83.5 Å²	83.5	6%	0.061	46%	0.455	C	S	.	.	H	α-helix	trans	-62.5	-45.5	175.6	167	0	0	0	109.1	M16 F19 L20 L23 L53 Q54 L60 M61	M16-V57 HydrophobicContact CE-CG1 3.61Å; M16-V57 HydrophobicContact CE-CG2 4.48Å; F19-V57 HydrophobicContact CE1-CG1 4.32Å; F19-V57 HydrophobicContact CE1-CG2 4.13Å; L20-V57 HydrophobicContact CD2-CG2 4.15Å; L23-V57 HydrophobicContact CD1-CG2 3.68Å; L53-V57 HydrophobicContact CD1-CG2 4.04Å; L53-V57 HydrophobicContact CG-CG2 4.14Å; L53-V57 VanDerWaalsContact O-CB 3.25Å; L53-V57 WeakPolarHBondContact O-CB 3.29Å; L53-V57 WeakPolarHBondContact O-CG2 3.4Å; L53-V57 PolarHBondContact O-N 3.5Å; Q54-V57 PolarHBondContact O-N 3.26Å; V57-L60 PolarHBondContact O-N 3.29Å; V57-M61 HydrophobicContact CG1-CE 3.95Å; V57-M61 HydrophobicContact CG1-CG 4.34Å; V57-M61 HydrophobicContact CG1-SD 4.23Å; V57-M61 WeakPolarHBondContact O-CB 3.21Å; V57-M61 VanDerWaalsContact O-CG 3.28Å; V57-M61 WeakPolarHBondContact O-CG 3.12Å; V57-M61 PolarHBondContact O-N 3.34Å
58	D	81.9	Confident	75.8	Confident	94 Å²	94	89 Å²	89	50%	0.503	47%	0.474	S	S	.	.	H	α-helix	trans	-60.6	-47.7	176.5	-70.4	-28.7	0	0	111.7	Q54 K56 L60 M61 E62	Q54-D58 WeakPolarHBondContact O-CB 3.5Å; Q54-D58 VanDerWaalsContact O-CG 3.26Å; Q54-D58 PolarHBondContact O-N 2.78Å; K56-D58 VanDerWaalsContact C-N 3.34Å; D58-L60 VanDerWaalsContact C-N 3.32Å; D58-L60 PolarHBondContact O-N 3.26Å; D58-M61 PolarHBondContact O-N 3.22Å; D58-M61 VanDerWaalsContact OD1-CE 3.23Å; D58-M61 WeakPolarHBondContact OD1-CE 3.37Å; D58-E62 WeakPolarHBondContact O-CB 3.27Å; D58-E62 PolarHBondContact O-N 3.06Å
59	G	82.4	Confident	74.2	Confident	37 Å²	37	89.2 Å²	89.2	38%	0.381	47%	0.474	S	S	.	.	H	α-helix	trans	-65.3	-32.7	177.4	0	0	0	0	113.9	E55 K56 S63	E55-G59 PolarHBondContact O-N 3.45Å; K56-G59 PolarHBondContact O-N 2.86Å; G59-S63 WeakPolarHBondContact O-CB 3.2Å; G59-S63 PolarHBondContact O-N 3.33Å
60	L	77.6	Confident	72.8	Confident	56 Å²	56	94.2 Å²	94.2	29%	0.293	51%	0.505	S	S	.	.	H	α-helix	trans	-76.2	-38.1	174.1	-76.4	171.4	0	0	112.2	F19 L23 K56 V57 D58 E62 S63 L64	F19-L60 HydrophobicContact CZ-CB 3.91Å; F19-L60 HydrophobicContact CZ-CD1 3.95Å; L23-L60 HydrophobicContact CD1-CD1 4.24Å; L23-L60 HydrophobicContact CD2-CD1 3.17Å; L23-L60 HydrophobicContact CG-CD1 4.32Å; K56-L60 WeakPolarHBondContact O-CB 3.34Å; K56-L60 WeakPolarHBondContact O-CG 3.33Å; K56-L60 PolarHBondContact O-N 3.28Å; V57-L60 PolarHBondContact O-N 3.29Å; D58-L60 VanDerWaalsContact C-N 3.32Å; D58-L60 PolarHBondContact O-N 3.26Å; L60-E62 VanDerWaalsContact C-N 3.26Å; L60-E62 PolarHBondContact O-N 3.07Å; L60-S63 PolarHBondContact O-N 3.48Å; L60-L64 VanDerWaalsContact O-CB 3.31Å; L60-L64 WeakPolarHBondContact O-CB 3.25Å; L60-L64 WeakPolarHBondContact O-CG 3.5Å; L60-L64 PolarHBondContact O-N 3.01Å
61	M	73.2	Confident	71.2	Confident	84 Å²	84	99.5 Å²	99.5	41%	0.414	53%	0.528	S	S	.	.	H	α-helix	trans	-60.7	-40.2	172.2	-75.8	-168.4	-55.8	0	110.3	V57 D58 L64 S65	V57-M61 HydrophobicContact CG1-CE 3.95Å; V57-M61 HydrophobicContact CG1-CG 4.34Å; V57-M61 HydrophobicContact CG1-SD 4.23Å; V57-M61 WeakPolarHBondContact O-CB 3.21Å; V57-M61 VanDerWaalsContact O-CG 3.28Å; V57-M61 WeakPolarHBondContact O-CG 3.12Å; V57-M61 PolarHBondContact O-N 3.34Å; D58-M61 PolarHBondContact O-N 3.22Å; D58-M61 VanDerWaalsContact OD1-CE 3.23Å; D58-M61 WeakPolarHBondContact OD1-CE 3.37Å; M61-L64 PolarHBondContact O-N 3.14Å; M61-S65 WeakPolarHBondContact O-CB 3.31Å; M61-S65 PolarHBondContact O-N 3.02Å; M61-S65 PolarHBondContact O-OG 3.31Å
62	E	78.5	Confident	69.2	Low	158 Å²	158	103.2 Å²	103.2	74%	0.738	54%	0.542	S	S	*	.	H	α-helix	trans	-64.9	-42.4	173.8	-170.7	171.3	-158.3	0	111.8	D58 L60 L64 S65	D58-E62 WeakPolarHBondContact O-CB 3.27Å; D58-E62 PolarHBondContact O-N 3.06Å; L60-E62 VanDerWaalsContact C-N 3.26Å; L60-E62 PolarHBondContact O-N 3.07Å; E62-L64 VanDerWaalsContact C-N 3.35Å; E62-L64 PolarHBondContact O-N 2.77Å; E62-S65 CarbonylContact O-C 3.56Å; E62-S65 PolarHBondContact O-N 2.93Å
63	S	75.3	Confident	67.1	Low	83 Å²	83	109.3 Å²	109.3	58%	0.58	58%	0.58	S	S	*	*	H	α-helix	trans	-68.9	-30	176.8	-173.3	0	0	0	113.8	G59 L60	G59-S63 WeakPolarHBondContact O-CB 3.2Å; G59-S63 PolarHBondContact O-N 3.33Å; L60-S63 PolarHBondContact O-N 3.48Å
64	L	68.4	Low	66.4	Low	113 Å²	113	114.4 Å²	114.4	59%	0.592	61%	0.607	S	S	*	*	H	α-helix	trans	-83.1	-27	175.9	-69.7	170.3	0	0	111.5	F19 L60 M61 E62 F66	F19-L64 HydrophobicContact CE2-CD1 4.06Å; F19-L64 HydrophobicContact CZ-CD1 4.43Å; L60-L64 VanDerWaalsContact O-CB 3.31Å; L60-L64 WeakPolarHBondContact O-CB 3.25Å; L60-L64 WeakPolarHBondContact O-CG 3.5Å; L60-L64 PolarHBondContact O-N 3.01Å; M61-L64 PolarHBondContact O-N 3.14Å; E62-L64 VanDerWaalsContact C-N 3.35Å; E62-L64 PolarHBondContact O-N 2.77Å; L64-F66 WeakPolarHBondContact O-CD2 3.45Å; L64-F66 PolarHBondContact O-N 2.82Å
65	S	63	Low	65.5	Low	82 Å²	82	114.6 Å²	114.6	57%	0.573	61%	0.612	S	S	*	*			trans	-75.9	66.8	170.7	-59	0	0	0	109.1	M61 E62	M61-S65 WeakPolarHBondContact O-CB 3.31Å; M61-S65 PolarHBondContact O-N 3.02Å; M61-S65 PolarHBondContact O-OG 3.31Å; E62-S65 CarbonylContact O-C 3.56Å; E62-S65 PolarHBondContact O-N 2.93Å
66	F	59.1	Low	64.5	Low	163 Å²	163	113.1 Å²	113.1	72%	0.715	61%	0.609	S	S	*	*			trans	-48	136.7	150.5	-67.3	-81.9	0	0	106.9	L64 M68	L64-F66 WeakPolarHBondContact O-CD2 3.45Å; L64-F66 PolarHBondContact O-N 2.82Å; F66-M68 PolarHBondContact O-N 2.85Å
67	P	59.2	Low	63.6	Low	114 Å²	114	113.8 Å²	113.8	74%	0.74	62%	0.619	S	S	*	*			trans	-55.3	110.4	177.2	23.5	-31.6	0	0	106.2	N69	P67-N69 PolarHBondContact O-N 3.36Å
68	M	53.9	Low	62.7	Low	171 Å²	171	120.3 Å²	120.3	84%	0.842	65%	0.654	S	S	*	*			trans	-62.4	83.6	154	-86.8	-166	-164	0	104.1	F66 V70	F66-M68 PolarHBondContact O-N 2.85Å; M68-V70 PolarHBondContact O-N 2.79Å
69	N	50.5	Low	61.4	Low	116 Å²	116	122 Å²	122	62%	0.62	66%	0.664	S	S	*	*			trans	-66.2	74.9	149.1	-142.1	42	0	0	104.4	P67 E71	P67-N69 PolarHBondContact O-N 3.36Å; N69-E71 VanDerWaalsContact ND2-CD 3.25Å; N69-E71 PolarHBondContact ND2-OE2 3.27Å; N69-E71 PolarHBondContact O-N 2.95Å
70	V	51.2	Low	59.9	Low	106 Å²	106	128.1 Å²	128.1	64%	0.642	68%	0.684	S	S	*	*			trans	-67.1	75	143.7	-83	0	0	0	104.8	M68 N72	M68-V70 PolarHBondContact O-N 2.79Å; V70-N72 VanDerWaalsContact C-N 3.33Å; V70-N72 PolarHBondContact O-N 3.42Å; V70-N72 PolarHBondContact O-ND2 3.48Å
71	E	47.6	Very low	58.5	Low	154 Å²	154	133.6 Å²	133.6	72%	0.72	71%	0.714	S	S	*	*			trans	-48.6	112.1	149.5	-106.5	158.1	130.2	0	104.9	N69 D73	N69-E71 VanDerWaalsContact ND2-CD 3.25Å; N69-E71 PolarHBondContact ND2-OE2 3.27Å; N69-E71 PolarHBondContact O-N 2.95Å; E71-D73 PolarHBondContact O-N 3.5Å
72	N	41.5	Very low	57.3	Low	155 Å²	155	137.8 Å²	137.8	83%	0.829	74%	0.739	S	S	*	*			trans	-65.6	114.8	167.4	-73.4	-111.8	0	0	105.2	V70	V70-N72 VanDerWaalsContact C-N 3.33Å; V70-N72 PolarHBondContact O-N 3.42Å; V70-N72 PolarHBondContact O-ND2 3.48Å
73	D	39	Very low	55.3	Low	238 Å²	238	135.9 Å²	135.9	100%	1.273	74%	0.739	S	S	*	*			trans	-129.6	0	151.9	-140.6	-88.1	0	0	107.6	E71	E71-D73 PolarHBondContact O-N 3.5Å

Retrieved 73 of 73 residues in 18.4 ms (Link to these results)

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