G4VTM3_SCHMA Loading...

Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial

AlphaFold DB , UniProt , Accession G4VTM3, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 66 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M40.1Very low53.7Low247 Ų247123.4 Ų123.4100%1.21767%0.666SS**  090.90-65.6169.8132.600109.1
2K50.3Low53.9Low219 Ų219118.9 Ų118.995%0.95265%0.651SS**  trans-112.1108.3176.4-85.3176.3172.2176.30107.1
3G55.7Low54Low53 Ų53126.2 Ų126.255%0.54666%0.663SS.*  trans176.4-6.4178.300000117.2F5G3-F5 PolarHBondContact O-N 3.1Å
4G58.2Low54.2Low64 Ų64124.4 Ų124.466%0.6667%0.666SS**SBendtrans-75.8-15.5-172.700000116.9
5F55.3Low53.9Low153 Ų153125.7 Ų125.767%0.67166%0.66SS**SBendtrans-116.9-0.6-169.9-76.6-81.3000115.4G3 P7 L8 L9G3-F5 PolarHBondContact O-N 3.1Å; F5-P7 VanDerWaalsContact C-CD 3.5Å; F5-L8 HydrophobicContact CD1-CD1 4.16Å; F5-L8 HydrophobicContact CE1-CD1 4.47Å; F5-L9 PolarHBondContact O-N 3.34Å
6Q54.8Low53.8Low123 Ų123122.1 Ų122.158%0.57564%0.641SS**Hα-helixtrans-61.5-40.8177.2-113.68824.700115.1L8 L9 N10Q6-L8 VanDerWaalsContact C-N 3.35Å; Q6-L8 PolarHBondContact O-N 3.35Å; Q6-L9 PolarHBondContact O-N 2.98Å; Q6-N10 PolarHBondContact O-N 3.49Å
7P55.5Low53.8Low78 Ų78117.5 Ų117.551%0.50662%0.62SS.*Hα-helixtrans-68-36.6-174.623.8-31.2000112F5 L9 N10 I11F5-P7 VanDerWaalsContact C-CD 3.5Å; P7-L9 PolarHBondContact O-N 3.17Å; P7-N10 PolarHBondContact O-N 2.98Å; P7-I11 WeakPolarHBondContact O-CD1 3.38Å; P7-I11 VanDerWaalsContact O-CG1 3.26Å; P7-I11 WeakPolarHBondContact O-CG1 3.38Å; P7-I11 PolarHBondContact O-N 3.13Å
8L55.6Low53.7Low111 Ų111116.6 Ų116.658%0.58161%0.614SS**Hα-helixtrans-65.8-38.4177.2-67.6170.5000112.1F5 Q6 S12F5-L8 HydrophobicContact CD1-CD1 4.16Å; F5-L8 HydrophobicContact CE1-CD1 4.47Å; Q6-L8 VanDerWaalsContact C-N 3.35Å; Q6-L8 PolarHBondContact O-N 3.35Å; L8-S12 WeakPolarHBondContact O-CB 3.33Å; L8-S12 PolarHBondContact O-N 3.19Å
9L54.3Low53.7Low94 Ų94113.6 Ų113.649%0.49260%0.601SS.*Hα-helixtrans-71.4-34.9176.5-78.3164.1000113F5 Q6 P7 S12 R13F5-L9 PolarHBondContact O-N 3.34Å; Q6-L9 PolarHBondContact O-N 2.98Å; P7-L9 PolarHBondContact O-N 3.17Å; L9-S12 PolarHBondContact O-N 3.31Å; L9-S12 PolarHBondContact O-OG 3.07Å; L9-R13 PolarHBondContact O-N 2.64Å
10N54.5Low53.7Low103 Ų103114.8 Ų114.855%0.55161%0.606SS**Hα-helixtrans-68.8-39.8174.5-80.6-5000111.2Q6 P7 S14Q6-N10 PolarHBondContact O-N 3.49Å; P7-N10 PolarHBondContact O-N 2.98Å; N10-S14 WeakPolarHBondContact O-CB 3.13Å; N10-S14 PolarHBondContact O-N 3.22Å; N10-S14 VanDerWaalsContact O-N 3.1Å; N10-S14 PolarHBondContact O-OG 3.18Å
11I56.6Low54.1Low112 Ų112117.9 Ų117.957%0.57461%0.61SS**Hα-helixtrans-64.7-41.4173.3-64.4164.2000110.1P7 R13 S14 Y15P7-I11 WeakPolarHBondContact O-CD1 3.38Å; P7-I11 VanDerWaalsContact O-CG1 3.26Å; P7-I11 WeakPolarHBondContact O-CG1 3.38Å; P7-I11 PolarHBondContact O-N 3.13Å; I11-R13 PolarHBondContact O-N 2.87Å; I11-S14 PolarHBondContact O-N 3.3Å; I11-Y15 VanDerWaalsContact O-CB 3.26Å; I11-Y15 WeakPolarHBondContact O-CB 3.25Å; I11-Y15 PolarHBondContact O-N 3.31Å
12S56.1Low55Low70 Ų70108.8 Ų108.849%0.4957%0.566SS.*Hα-helixtrans-68-34.4-178.778.50000113.9L8 L9L8-S12 WeakPolarHBondContact O-CB 3.33Å; L8-S12 PolarHBondContact O-N 3.19Å; L9-S12 PolarHBondContact O-N 3.31Å; L9-S12 PolarHBondContact O-OG 3.07Å
13R55.3Low55.5Low213 Ų213101.8 Ų101.880%0.80454%0.543SS*.Hα-helixtrans-75.5-35.9176.2-75.4-175.3176.4-177.1-0.6112.7L9 I11L9-R13 PolarHBondContact O-N 2.64Å; I11-R13 PolarHBondContact O-N 2.87Å
14S56.3Low56.1Low101 Ų101105.8 Ų105.871%0.70655%0.552SS**Hα-helixtrans-84.4-13.6177.2-61.20000113.3N10 I11 D16N10-S14 WeakPolarHBondContact O-CB 3.13Å; N10-S14 PolarHBondContact O-N 3.22Å; N10-S14 VanDerWaalsContact O-N 3.1Å; N10-S14 PolarHBondContact O-OG 3.18Å; I11-S14 PolarHBondContact O-N 3.3Å; S14-D16 PolarHBondContact O-N 3.24Å
15Y50.5Low56.6Low145 Ų145111.2 Ų111.257%0.56956%0.557SS**  trans-73.262.3159.5-150.9-92.4000108.1I11 P17I11-Y15 VanDerWaalsContact O-CB 3.26Å; I11-Y15 WeakPolarHBondContact O-CB 3.25Å; I11-Y15 PolarHBondContact O-N 3.31Å; Y15-P17 VanDerWaalsContact O-CD 3.29Å; Y15-P17 WeakPolarHBondContact O-CD 3.46Å; Y15-P17 VanDerWaalsContact O-N 3.09Å
16D51.6Low57.1Low67 Ų67104.9 Ų104.936%0.35853%0.53SS..  trans-47.6121.9153.2-154.9-10.5000104.5S14 I18 R21S14-D16 PolarHBondContact O-N 3.24Å; D16-I18 HydrophobicContact CB-CG1 4.26Å; D16-I18 WeakPolarHBondContact O-CG1 3.4Å; D16-I18 PolarHBondContact O-N 2.61Å; D16-R21 VanDerWaalsContact CG-NH1 3.33Å; D16-R21 WeakPolarHBondContact OD1-CD 3.14Å; D16-R21 IonicContact OD1-CZ 2.94Å; D16-R21 IonicContact OD1-NE 3.04Å; D16-R21 PolarHBondContact OD1-NE 2.92Å; D16-R21 IonicContact OD1-NH1 2.76Å; D16-R21 PolarHBondContact OD1-NH1 3.04Å; D16-R21 IonicContact OD1-NH2 3.77Å; D16-R21 IonicContact OD2-NH1 3.21Å; D16-R21 PolarHBondContact OD2-NH1 3.4Å
17P53.6Low58.2Low45 Ų45102.3 Ų102.329%0.29253%0.526SS..  trans-68.676.317627.2-32.5000106.7Y15 V19 I20 R21Y15-P17 VanDerWaalsContact O-CD 3.29Å; Y15-P17 WeakPolarHBondContact O-CD 3.46Å; Y15-P17 VanDerWaalsContact O-N 3.09Å; P17-V19 PolarHBondContact O-N 3.21Å; P17-I20 HydrophobicContact CB-CB 4.12Å; P17-I20 HydrophobicContact CB-CD1 4.06Å; P17-I20 HydrophobicContact CB-CG1 4.07Å; P17-I20 PolarHBondContact O-N 2.76Å; P17-R21 PolarHBondContact O-N 3.04Å
18I51.7Low59.3Low100 Ų100108.7 Ų108.751%0.51354%0.54SS..Hα-helixtrans-53.5-29.7177.1-69.5167.9000108.3D16 M26D16-I18 HydrophobicContact CB-CG1 4.26Å; D16-I18 WeakPolarHBondContact O-CG1 3.4Å; D16-I18 PolarHBondContact O-N 2.61Å; I18-M26 HydrophobicContact CG2-SD 4.4Å
19V54.3Low60.7Low61 Ų61109.8 Ų109.837%0.3755%0.545SS..Hα-helixtrans-69.3-34.3176.6-169.80000112.9P17 F34P17-V19 PolarHBondContact O-N 3.21Å; V19-F34 HydrophobicContact CG2-CD1 3.85Å; V19-F34 HydrophobicContact CG2-CD2 3.95Å; V19-F34 HydrophobicContact CG2-CE1 3.79Å; V19-F34 HydrophobicContact CG2-CE2 3.9Å; V19-F34 HydrophobicContact CG2-CG 3.93Å; V19-F34 HydrophobicContact CG2-CZ 3.82Å
20I54.8Low61.9Low137 Ų137113.4 Ų113.470%0.70355%0.552SS**Hα-helixtrans-92.8-37.8-177-55.5177000111.6P17 N22P17-I20 HydrophobicContact CB-CB 4.12Å; P17-I20 HydrophobicContact CB-CD1 4.06Å; P17-I20 HydrophobicContact CB-CG1 4.07Å; P17-I20 PolarHBondContact O-N 2.76Å; I20-N22 PolarHBondContact O-N 2.83Å
21R60.4Low63.1Low179 Ų179113.4 Ų113.468%0.67554%0.544SS*.Hα-helixtrans-72.1-26.5-170.7-70.8-169.8177.9176.7-4.4114.6D16 P17D16-R21 VanDerWaalsContact CG-NH1 3.33Å; D16-R21 WeakPolarHBondContact OD1-CD 3.14Å; D16-R21 IonicContact OD1-CZ 2.94Å; D16-R21 IonicContact OD1-NE 3.04Å; D16-R21 PolarHBondContact OD1-NE 2.92Å; D16-R21 IonicContact OD1-NH1 2.76Å; D16-R21 PolarHBondContact OD1-NH1 3.04Å; D16-R21 IonicContact OD1-NH2 3.77Å; D16-R21 IonicContact OD2-NH1 3.21Å; D16-R21 PolarHBondContact OD2-NH1 3.4Å; P17-R21 PolarHBondContact O-N 3.04Å
22N59Low64.4Low57 Ų57113.3 Ų113.331%0.30554%0.544SS..  trans-159.284.2177.2-155-32.3000113.3I20 N24 K25I20-N22 PolarHBondContact O-N 2.83Å; N22-N24 PolarHBondContact O-N 3.43Å; N22-N24 PolarHBondContact OD1-N 3.1Å; N22-K25 HydrophobicContact CB-CB 4.24Å; N22-K25 HydrophobicContact CB-CG 4.43Å; N22-K25 VanDerWaalsContact ND2-CD 3.25Å; N22-K25 WeakPolarHBondContact ND2-CD 3.5Å; N22-K25 VanDerWaalsContact ND2-CE 3.33Å; N22-K25 WeakPolarHBondContact ND2-CE 3.26Å; N22-K25 WeakPolarHBondContact ND2-CG 3.26Å; N22-K25 PolarHBondContact O-N 3.47Å; N22-K25 PolarHBondContact OD1-N 3.49Å
23P61Low65.8Low71 Ų71111.6 Ų111.646%0.46154%0.538SS..G310 helixtrans-55.5-40.2175.421.7-31.7000110.7K25 M26 R31P23-K25 PolarHBondContact O-N 2.78Å; P23-M26 PolarHBondContact O-N 3.25Å; P23-R31 PolarHBondContact O-NE 3.37Å; P23-R31 VanDerWaalsContact O-NE 3.07Å; P23-R31 PolarHBondContact O-NH2 2.94Å
24N68.2Low67.1Low137 Ų137104.8 Ų104.873%0.73351%0.514SS*.G310 helixtrans-64.4-30.3-174.3-72.9-21.6000114.9N22 M26N22-N24 PolarHBondContact O-N 3.43Å; N22-N24 PolarHBondContact OD1-N 3.1Å; N24-M26 VanDerWaalsContact C-N 3.33Å
25K68.7Low68.4Low178 Ų178104.8 Ų104.877%0.77451%0.505SS*.G310 helixtrans-81.6-8.2178.3-74-174.2-175.3-175.30114.2N22 P23N22-K25 HydrophobicContact CB-CB 4.24Å; N22-K25 HydrophobicContact CB-CG 4.43Å; N22-K25 VanDerWaalsContact ND2-CD 3.25Å; N22-K25 WeakPolarHBondContact ND2-CD 3.5Å; N22-K25 VanDerWaalsContact ND2-CE 3.33Å; N22-K25 WeakPolarHBondContact ND2-CE 3.26Å; N22-K25 WeakPolarHBondContact ND2-CG 3.26Å; N22-K25 PolarHBondContact O-N 3.47Å; N22-K25 PolarHBondContact OD1-N 3.49Å; P23-K25 PolarHBondContact O-N 2.78Å
26M66.4Low70.1Confident21 Ų21100.7 Ų100.710%0.10350%0.502CS..SBendtrans-87125.5-175.2-164.3149.574.500111.9I18 P23 N24 R30 R31 F34I18-M26 HydrophobicContact CG2-SD 4.4Å; P23-M26 PolarHBondContact O-N 3.25Å; N24-M26 VanDerWaalsContact C-N 3.33Å; M26-R30 HydrophobicContact CG-CB 3.55Å; M26-R30 HydrophobicContact SD-CB 3.92Å; M26-R31 HydrophobicContact CB-CG 3.99Å; M26-R31 HydrophobicContact CE-CB 4.24Å; M26-R31 HydrophobicContact CE-CG 3.61Å; M26-R31 HydrophobicContact CG-CG 3.95Å; M26-R31 PolarHBondContact O-NE 3Å; M26-R31 VanDerWaalsContact O-NE 3.13Å; M26-F34 HydrophobicContact CE-CD2 3.5Å; M26-F34 VanDerWaalsContact CE-CD2 3.5Å; M26-F34 HydrophobicContact CE-CE2 3.95Å; M26-F34 HydrophobicContact CE-CG 4.49Å; M26-F34 HydrophobicContact SD-CD2 3.77Å; M26-F34 HydrophobicContact SD-CE2 3.6Å; M26-F34 VanDerWaalsContact SD-CE2 3.6Å
27S77.5Confident71.7Confident69 Ų69103 Ų10348%0.48351%0.514SS..  trans-52.1139.9171.41730000110.9I29 R30 R31S27-I29 PolarHBondContact O-N 3.35Å; S27-I29 VanDerWaalsContact O-N 3.1Å; S27-R30 PolarHBondContact O-N 3.38Å; S27-R31 PolarHBondContact O-N 3Å; S27-R31 VanDerWaalsContact O-N 3.17Å
28R79.6Confident73.1Confident211 Ų211108.8 Ų108.880%0.79654%0.535SS*.Hα-helixtrans-51-37.9-178.7-72.8-176.8179.7176.50.4112.1R31 L32R28-R31 PolarHBondContact O-N 2.84Å; R28-L32 WeakPolarHBondContact O-CG 3.4Å; R28-L32 PolarHBondContact O-N 3.24Å
29I84.3Confident74.6Confident134 Ų134107.7 Ų107.769%0.68753%0.528SS*.Hα-helixtrans-63.4-44.1179.4-61.6168000111.3S27 L32 G33S27-I29 PolarHBondContact O-N 3.35Å; S27-I29 VanDerWaalsContact O-N 3.1Å; I29-L32 PolarHBondContact O-N 3.4Å; I29-G33 PolarHBondContact O-N 2.95Å
30R80.4Confident76.1Confident171 Ų171110.6 Ų110.665%0.64554%0.541SS*.Hα-helixtrans-65.3-40.6177.5-73.1-174.3179.1179.7-0.3111.4M26 S27 L32 G33 F34M26-R30 HydrophobicContact CG-CB 3.55Å; M26-R30 HydrophobicContact SD-CB 3.92Å; S27-R30 PolarHBondContact O-N 3.38Å; R30-L32 PolarHBondContact O-N 3.33Å; R30-G33 PolarHBondContact O-N 3.4Å; R30-F34 WeakPolarHBondContact O-CD2 3.49Å; R30-F34 PolarHBondContact O-N 3.47Å
31R79.6Confident77.7Confident102 Ų102108.1 Ų108.139%0.38553%0.534SS..Hα-helixtrans-59-46.1174.6-63.4-174.8-169.1178.88.9111.8P23 M26 S27 R28 G33 F34 L35P23-R31 PolarHBondContact O-NE 3.37Å; P23-R31 VanDerWaalsContact O-NE 3.07Å; P23-R31 PolarHBondContact O-NH2 2.94Å; M26-R31 HydrophobicContact CB-CG 3.99Å; M26-R31 HydrophobicContact CE-CB 4.24Å; M26-R31 HydrophobicContact CE-CG 3.61Å; M26-R31 HydrophobicContact CG-CG 3.95Å; M26-R31 PolarHBondContact O-NE 3Å; M26-R31 VanDerWaalsContact O-NE 3.13Å; S27-R31 PolarHBondContact O-N 3Å; S27-R31 VanDerWaalsContact O-N 3.17Å; R28-R31 PolarHBondContact O-N 2.84Å; R31-G33 VanDerWaalsContact C-N 3.35Å; R31-F34 PolarHBondContact O-N 3Å; R31-L35 WeakPolarHBondContact O-CB 3.29Å; R31-L35 PolarHBondContact O-N 2.93Å
32L83.5Confident78.9Confident111 Ų111104.5 Ų104.558%0.58153%0.526SS*.Hα-helixtrans-64.2-39.4176.1-70.3170.3000112R28 I29 R30 L35 A36R28-L32 WeakPolarHBondContact O-CG 3.4Å; R28-L32 PolarHBondContact O-N 3.24Å; I29-L32 PolarHBondContact O-N 3.4Å; R30-L32 PolarHBondContact O-N 3.33Å; L32-L35 PolarHBondContact O-N 2.92Å; L32-A36 WeakPolarHBondContact O-CB 3.36Å; L32-A36 PolarHBondContact O-N 2.97Å
33G85.7Confident80.3Confident34 Ų34106.2 Ų106.235%0.35154%0.538SS..Hα-helixtrans-60.8-47.4174.400000112.7I29 R30 R31 A36 L37I29-G33 PolarHBondContact O-N 2.95Å; R30-G33 PolarHBondContact O-N 3.4Å; R31-G33 VanDerWaalsContact C-N 3.35Å; G33-A36 PolarHBondContact O-N 3.42Å; G33-L37 WeakPolarHBondContact O-CG 3.4Å; G33-L37 PolarHBondContact O-N 3.42Å
34F82.2Confident81.5Confident70 Ų70104.5 Ų104.531%0.30753%0.534SS..Hα-helixtrans-63.2-41.3174.8-78.2-66.1000112.5V19 M26 R30 R31 L37 F38V19-F34 HydrophobicContact CG2-CD1 3.85Å; V19-F34 HydrophobicContact CG2-CD2 3.95Å; V19-F34 HydrophobicContact CG2-CE1 3.79Å; V19-F34 HydrophobicContact CG2-CE2 3.9Å; V19-F34 HydrophobicContact CG2-CG 3.93Å; V19-F34 HydrophobicContact CG2-CZ 3.82Å; M26-F34 HydrophobicContact CE-CD2 3.5Å; M26-F34 VanDerWaalsContact CE-CD2 3.5Å; M26-F34 HydrophobicContact CE-CE2 3.95Å; M26-F34 HydrophobicContact CE-CG 4.49Å; M26-F34 HydrophobicContact SD-CD2 3.77Å; M26-F34 HydrophobicContact SD-CE2 3.6Å; M26-F34 VanDerWaalsContact SD-CE2 3.6Å; R30-F34 WeakPolarHBondContact O-CD2 3.49Å; R30-F34 PolarHBondContact O-N 3.47Å; R31-F34 PolarHBondContact O-N 3Å; F34-L37 PolarHBondContact O-N 3.32Å; F34-F38 WeakPolarHBondContact O-CB 3.36Å; F34-F38 PolarHBondContact O-N 2.83Å
35L83.7Confident82.4Confident100 Ų100100.8 Ų100.852%0.52452%0.522SS..Hα-helixtrans-60.5-46.3175-177.466.5000111R31 L32 L37 F38 M39R31-L35 WeakPolarHBondContact O-CB 3.29Å; R31-L35 PolarHBondContact O-N 2.93Å; L32-L35 PolarHBondContact O-N 2.92Å; L35-L37 PolarHBondContact O-N 3.42Å; L35-F38 PolarHBondContact O-N 2.92Å; L35-M39 HydrophobicContact CD1-CG 4.35Å; L35-M39 HydrophobicContact CG-CG 4.42Å; L35-M39 WeakPolarHBondContact O-CB 3.23Å; L35-M39 VanDerWaalsContact O-CG 3.23Å; L35-M39 WeakPolarHBondContact O-CG 3.49Å; L35-M39 PolarHBondContact O-N 3.41Å
36A85Confident83.3Confident60 Ų6097.1 Ų97.150%0.49651%0.51SS..Hα-helixtrans-61.2-43.8177.500000111.8L32 G33 F38 M39 L40L32-A36 WeakPolarHBondContact O-CB 3.36Å; L32-A36 PolarHBondContact O-N 2.97Å; G33-A36 PolarHBondContact O-N 3.42Å; A36-F38 VanDerWaalsContact C-N 3.29Å; A36-F38 PolarHBondContact O-N 3.05Å; A36-M39 PolarHBondContact O-N 3.02Å; A36-L40 WeakPolarHBondContact O-CB 3.46Å; A36-L40 PolarHBondContact O-N 3.41Å
37L85.3Confident84.2Confident116 Ų11697.7 Ų97.761%0.60752%0.521SS*.Hα-helixtrans-60.5-38175.1-74.7170.4000112.3G33 F34 L35 P41G33-L37 WeakPolarHBondContact O-CG 3.4Å; G33-L37 PolarHBondContact O-N 3.42Å; F34-L37 PolarHBondContact O-N 3.32Å; L35-L37 PolarHBondContact O-N 3.42Å; L37-P41 WeakPolarHBondContact O-CD 3.15Å
38F82.6Confident84.6Confident166 Ų16699.3 Ų99.373%0.72852%0.523SS*.Hα-helixtrans-72.8-33.9177.5-168.6-97.3000112.8F34 L35 A36 P41F34-F38 WeakPolarHBondContact O-CB 3.36Å; F34-F38 PolarHBondContact O-N 2.83Å; L35-F38 PolarHBondContact O-N 2.92Å; A36-F38 VanDerWaalsContact C-N 3.29Å; A36-F38 PolarHBondContact O-N 3.05Å; F38-P41 WeakPolarHBondContact O-CD 3.49Å
39M84.7Confident84.7Confident76 Ų7692 Ų9237%0.37451%0.508SS..Hα-helixtrans-78.2-24.4178.3-67-66.5-7600112.8L35 A36 M42 V43L35-M39 HydrophobicContact CD1-CG 4.35Å; L35-M39 HydrophobicContact CG-CG 4.42Å; L35-M39 WeakPolarHBondContact O-CB 3.23Å; L35-M39 VanDerWaalsContact O-CG 3.23Å; L35-M39 WeakPolarHBondContact O-CG 3.49Å; L35-M39 PolarHBondContact O-N 3.41Å; A36-M39 PolarHBondContact O-N 3.02Å; M39-M42 HydrophobicContact CE-CE 3.41Å; M39-M42 VanDerWaalsContact CE-CE 3.41Å; M39-M42 WeakPolarHBondContact O-CA 3.36Å; M39-M42 WeakPolarHBondContact O-CB 3.48Å; M39-M42 PolarHBondContact O-N 3.39Å; M39-M42 HydrophobicContact SD-CE 4.02Å; M39-V43 WeakPolarHBondContact O-CG2 3.36Å; M39-V43 PolarHBondContact O-N 3Å
40L86.2Confident84.5Confident123 Ų12388.9 Ų88.964%0.64450%0.496SS*.Hα-helixtrans-58.1-45.1-176.4-172.8142.3000113.5A36 M42 V43 G44A36-L40 WeakPolarHBondContact O-CB 3.46Å; A36-L40 PolarHBondContact O-N 3.41Å; L40-M42 VanDerWaalsContact C-N 3.3Å; L40-M42 PolarHBondContact O-N 2.96Å; L40-V43 PolarHBondContact O-N 2.92Å; L40-G44 PolarHBondContact O-N 3.19Å
41P87.6Confident84.4Confident85 Ų8584.2 Ų84.255%0.55249%0.486SS*.Hα-helixtrans-58.3-38170.4-25.733.3000113.8L37 F38 G44 A45L37-P41 WeakPolarHBondContact O-CD 3.15Å; F38-P41 WeakPolarHBondContact O-CD 3.49Å; P41-G44 PolarHBondContact O-N 3.4Å; P41-A45 WeakPolarHBondContact O-CB 3.47Å; P41-A45 PolarHBondContact O-N 2.98Å
42M86.6Confident84.1Confident102 Ų10286.9 Ų86.950%0.50250%0.501SS..Hα-helixtrans-68.7-43.2-179.1-162.81778300111.3M39 L40 A45 L46M39-M42 HydrophobicContact CE-CE 3.41Å; M39-M42 VanDerWaalsContact CE-CE 3.41Å; M39-M42 WeakPolarHBondContact O-CA 3.36Å; M39-M42 WeakPolarHBondContact O-CB 3.48Å; M39-M42 PolarHBondContact O-N 3.39Å; M39-M42 HydrophobicContact SD-CE 4.02Å; L40-M42 VanDerWaalsContact C-N 3.3Å; L40-M42 PolarHBondContact O-N 2.96Å; M42-A45 PolarHBondContact O-N 2.91Å; M42-L46 WeakPolarHBondContact O-CG 3.45Å; M42-L46 PolarHBondContact O-N 3.25Å
43V87.4Confident83.4Confident93 Ų9389.4 Ų89.456%0.56451%0.507SS*.Hα-helixtrans-64.9-41.1174.4178.30000110.8M39 L40 L46 G47M39-V43 WeakPolarHBondContact O-CG2 3.36Å; M39-V43 PolarHBondContact O-N 3Å; L40-V43 PolarHBondContact O-N 2.92Å; V43-L46 PolarHBondContact O-N 3.34Å; V43-G47 PolarHBondContact O-N 2.87Å
44G87.1Confident82.4Confident36 Ų3695.5 Ų95.537%0.37153%0.526SS..Hα-helixtrans-59.8-46.4174.300000112.5L40 P41 L46 G47 I48L40-G44 PolarHBondContact O-N 3.19Å; P41-G44 PolarHBondContact O-N 3.4Å; G44-L46 PolarHBondContact O-N 3.4Å; G44-G47 PolarHBondContact O-N 3.28Å; G44-I48 WeakPolarHBondContact O-CG1 3.32Å; G44-I48 PolarHBondContact O-N 3.26Å
45A86.9Confident81.4Confident58 Ų5898.4 Ų98.448%0.47954%0.54SS..Hα-helixtrans-61.9-42.2176.600000112.3P41 M42 I48 A49P41-A45 WeakPolarHBondContact O-CB 3.47Å; P41-A45 PolarHBondContact O-N 2.98Å; M42-A45 PolarHBondContact O-N 2.91Å; A45-I48 PolarHBondContact O-N 2.7Å; A45-A49 WeakPolarHBondContact O-CB 3.43Å; A45-A49 PolarHBondContact O-N 3.01Å
46L87.4Confident80Confident102 Ų10298 Ų9853%0.53455%0.546SS..Hα-helixtrans-62.5-42174.4-75.3167000112M42 V43 G44 A49 T50M42-L46 WeakPolarHBondContact O-CG 3.45Å; M42-L46 PolarHBondContact O-N 3.25Å; V43-L46 PolarHBondContact O-N 3.34Å; G44-L46 PolarHBondContact O-N 3.4Å; L46-A49 PolarHBondContact O-N 2.9Å; L46-T50 WeakPolarHBondContact O-CB 3.43Å; L46-T50 VanDerWaalsContact O-CG2 3.32Å; L46-T50 WeakPolarHBondContact O-CG2 3.38Å; L46-T50 PolarHBondContact O-N 3.24Å; L46-T50 PolarHBondContact O-OG1 2.92Å
47G85.7Confident78.7Confident33 Ų33103.9 Ų103.934%0.3456%0.561SS.*Hα-helixtrans-61.6-43.9175.300000112.6V43 G44 T50 T51V43-G47 PolarHBondContact O-N 2.87Å; G44-G47 PolarHBondContact O-N 3.28Å; G47-T50 WeakPolarHBondContact CA-OG1 3.37Å; G47-T50 PolarHBondContact O-OG1 3.42Å; G47-T51 WeakPolarHBondContact O-CB 3.33Å; G47-T51 PolarHBondContact O-N 2.9Å; G47-T51 PolarHBondContact O-OG1 3.38Å
48I85.2Confident77.4Confident102 Ų102105.8 Ų105.852%0.52357%0.566SS.*Hα-helixtrans-64.1-48.8176.2-66.8167.8000110.3G44 A45 T50 T51 F52G44-I48 WeakPolarHBondContact O-CG1 3.32Å; G44-I48 PolarHBondContact O-N 3.26Å; A45-I48 PolarHBondContact O-N 2.7Å; I48-T50 PolarHBondContact O-N 2.96Å; I48-T51 WeakPolarHBondContact O-CB 3.22Å; I48-T51 PolarHBondContact O-N 2.99Å; I48-F52 HydrophobicContact CG2-CD2 3.66Å; I48-F52 HydrophobicContact CG2-CE2 3.45Å; I48-F52 VanDerWaalsContact CG2-CE2 3.45Å; I48-F52 WeakPolarHBondContact O-CD2 3.32Å; I48-F52 PolarHBondContact O-N 3.18Å
49A82.3Confident76.2Confident58 Ų58107.5 Ų107.548%0.47957%0.569SS.*Hα-helixtrans-61.7-41.9-178.800000112.6A45 L46 F52 K53A45-A49 WeakPolarHBondContact O-CB 3.43Å; A45-A49 PolarHBondContact O-N 3.01Å; L46-A49 PolarHBondContact O-N 2.9Å; A49-F52 PolarHBondContact O-N 2.95Å; A49-K53 WeakPolarHBondContact O-CB 3.4Å; A49-K53 PolarHBondContact O-N 3.39Å
50T80.4Confident74.9Confident69 Ų69111.3 Ų111.342%0.42358%0.584SS.*Hα-helixtrans-67.1-36.8175.649.90000112.2L46 G47 I48 K53 H54L46-T50 WeakPolarHBondContact O-CB 3.43Å; L46-T50 VanDerWaalsContact O-CG2 3.32Å; L46-T50 WeakPolarHBondContact O-CG2 3.38Å; L46-T50 PolarHBondContact O-N 3.24Å; L46-T50 PolarHBondContact O-OG1 2.92Å; G47-T50 WeakPolarHBondContact CA-OG1 3.37Å; G47-T50 PolarHBondContact O-OG1 3.42Å; I48-T50 PolarHBondContact O-N 2.96Å; T50-K53 PolarHBondContact O-N 2.81Å; T50-H54 PolarHBondContact O-CD2 3.46Å; T50-H54 VanDerWaalsContact O-CD2 3.28Å; T50-H54 PolarHBondContact O-N 3.42Å
51T77.4Confident73.7Confident73 Ų73106.8 Ų106.845%0.44857%0.567SS.*Hα-helixtrans-61.6-45.9173.7-56.70000111.5G47 I48 K53 H54 H55G47-T51 WeakPolarHBondContact O-CB 3.33Å; G47-T51 PolarHBondContact O-N 2.9Å; G47-T51 PolarHBondContact O-OG1 3.38Å; I48-T51 WeakPolarHBondContact O-CB 3.22Å; I48-T51 PolarHBondContact O-N 2.99Å; T51-K53 VanDerWaalsContact C-N 3.33Å; T51-K53 PolarHBondContact O-N 2.9Å; T51-H54 PolarHBondContact O-N 3.29Å; T51-H55 WeakPolarHBondContact O-CB 3.46Å; T51-H55 PolarHBondContact O-CD2 3.43Å; T51-H55 VanDerWaalsContact O-CD2 3.26Å; T51-H55 PolarHBondContact O-N 2.96Å
52F72.6Confident72.6Confident157 Ų157107.7 Ų107.769%0.68957%0.573SS**Hα-helixtrans-64.1-37174.1-79.4-71.5000112.7I48 A49 H55 S56I48-F52 HydrophobicContact CG2-CD2 3.66Å; I48-F52 HydrophobicContact CG2-CE2 3.45Å; I48-F52 VanDerWaalsContact CG2-CE2 3.45Å; I48-F52 WeakPolarHBondContact O-CD2 3.32Å; I48-F52 PolarHBondContact O-N 3.18Å; A49-F52 PolarHBondContact O-N 2.95Å; F52-H55 CarbonylContact O-C 3.33Å; F52-H55 PolarHBondContact O-N 3.08Å; F52-S56 PolarHBondContact O-N 3.48Å; F52-S56 VanDerWaalsContact O-N 3.08Å
53K69.8Low71.3Confident165 Ų165110.7 Ų110.772%0.71759%0.586SS**Hα-helixtrans-64.4-41.6175.7-173179.4178.8-1780112.1A49 T50 T51 S56A49-K53 WeakPolarHBondContact O-CB 3.4Å; A49-K53 PolarHBondContact O-N 3.39Å; T50-K53 PolarHBondContact O-N 2.81Å; T51-K53 VanDerWaalsContact C-N 3.33Å; T51-K53 PolarHBondContact O-N 2.9Å; K53-S56 PolarHBondContact O-OG 3.34Å
54H63.6Low70.1Confident162 Ų162113.6 Ų113.675%0.7560%0.596SS**Hα-helixtrans-72.9-32176.4-81.1-67000112.7T50 T51 S56T50-H54 PolarHBondContact O-CD2 3.46Å; T50-H54 VanDerWaalsContact O-CD2 3.28Å; T50-H54 PolarHBondContact O-N 3.42Å; T51-H54 PolarHBondContact O-N 3.29Å; H54-S56 VanDerWaalsContact C-N 3.32Å
55H61.2Low68.7Low130 Ų130118.2 Ų118.260%0.60262%0.617SS**THydrogen-bonded Turntrans-94.228.4175.3-66.4-57.5000113.5T51 F52 K57T51-H55 WeakPolarHBondContact O-CB 3.46Å; T51-H55 PolarHBondContact O-CD2 3.43Å; T51-H55 VanDerWaalsContact O-CD2 3.26Å; T51-H55 PolarHBondContact O-N 2.96Å; F52-H55 CarbonylContact O-C 3.33Å; F52-H55 PolarHBondContact O-N 3.08Å; H55-K57 PolarHBondContact O-N 3.01Å
56S55.2Low67Low92 Ų92128.2 Ų128.264%0.64365%0.65SS**  trans-67.663.3159.969.60000108.9F52 K53 H54 E58F52-S56 PolarHBondContact O-N 3.48Å; F52-S56 VanDerWaalsContact O-N 3.08Å; K53-S56 PolarHBondContact O-OG 3.34Å; H54-S56 VanDerWaalsContact C-N 3.32Å; S56-E58 PolarHBondContact O-N 2.95Å
57K57.8Low66Low184 Ų184129.6 Ų129.680%0.866%0.655SS**  trans-54.6112.6154.5-74.1-171.2175.9-176.10104H55 Y59H55-K57 PolarHBondContact O-N 3.01Å; K57-Y59 PolarHBondContact O-N 2.68Å
58E58.4Low65Low156 Ų156134.6 Ų134.673%0.72967%0.672SS**  trans-10.9100168.3-68170.4171.100110.8S56 K60S56-E58 PolarHBondContact O-N 2.95Å; E58-K60 HydrophobicContact CB-CG 4.41Å; E58-K60 PolarHBondContact O-N 2.93Å
59Y57.8Low63.8Low201 Ų201136.4 Ų136.479%0.78868%0.68SS**  trans-64.785.6160.4-178.2-99.4000105.1K57 G61K57-Y59 PolarHBondContact O-N 2.68Å; Y59-G61 PolarHBondContact O-N 2.73Å
60K57.5Low62.7Low157 Ų157141.1 Ų141.168%0.68369%0.692SS**  trans-65.495.3156.1-67.4-169.8180-172.20102.7E58E58-K60 HydrophobicContact CB-CG 4.41Å; E58-K60 PolarHBondContact O-N 2.93Å
61G59.6Low61.6Low28 Ų28145.6 Ų145.629%0.28971%0.709SS.*  trans-48.2161.7166.600000108.9Y59 E63Y59-G61 PolarHBondContact O-N 2.73Å; G61-E63 PolarHBondContact O-N 2.76Å
62P64.8Low60.6Low103 Ų103150.4 Ų150.467%0.66973%0.726SS**  trans-51.1111.317822.4-31.2000107.3I64P62-I64 PolarHBondContact O-N 2.8Å
63E59.7Low59.7Low166 Ų166149.9 Ų149.978%0.77673%0.729SS**  trans-59.899.3162.6-92.9-179172.100102.4G61 V65G61-E63 PolarHBondContact O-N 2.76Å; E63-V65 PolarHBondContact O-N 2.78Å
64I61.1Low59Low153 Ų153148.8 Ų148.879%0.78573%0.73SS**  trans-62.399.5169.4-56.9173.9000102.4P62 K66P62-I64 PolarHBondContact O-N 2.8Å; I64-K66 PolarHBondContact O-N 3.1Å; I64-K66 VanDerWaalsContact O-N 3.1Å
65V57.5Low58.6Low134 Ų134147.7 Ų147.781%0.81273%0.728SS**  trans-51.6120.4174.8-178.80000105.6E63E63-V65 PolarHBondContact O-N 2.78Å
66K52.3Low58.3Low268 Ų268149.3 Ų149.3100%1.16574%0.74SS**  trans-50.80-178.1-76180175.1176.80112.4I64I64-K66 PolarHBondContact O-N 3.1Å; I64-K66 VanDerWaalsContact O-N 3.1Å

Retrieved 66 of 66 residues in 13.5 ms (Link to these results)