Q99NV7_RAT Loading...

Brain-derived neurotrophic factor

During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. Important signaling molecule that activates signaling cascades downstream of NTRK2. Activates signaling cascades via the heterodimeric receptor formed by NGFR and SORCS2. Signaling via NGFR and SORCS2 plays a role in synaptic plasticity and long-term depression (LTD). Binding to NGFR and SORCS2 promotes neuronal apoptosis. Promotes neuronal growth cone collapse. Important signaling molecule that activates signaling cascades downstream of NTRK2. During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. The versatility of BDNF is emphasized by its contribution to a range of adaptive neuronal responses including long-term potentiation (LTP), long-term depression (LTD), certain forms of short-term synaptic plasticity, as well as homeostatic regulation of intrinsic neuronal excitability.

AlphaFold DB , UniProt , Accession Q99NV7, Species RAT (Rattus norvegicus, Rat), Gene Bdnf, Length 188 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1Y33.1Very low42.2Very low284 Ų284159.4 Ų159.4100%1.11485%0.849SS**  095.60-97.4-93.9000108.4
2F37.7Very low42.3Very low218 Ų218162.3 Ų162.396%0.95685%0.854SS**  trans-127.895.9170-79.3-79.6000106.6
3G38.7Very low41.9Very low64 Ų64157.7 Ų157.766%0.6685%0.853SS**  trans-79.5150.7170.800000110M5G3-M5 PolarHBondContact O-N 3.2Å
4C49Very low41.9Very low107 Ų107157.4 Ų157.472%0.72385%0.851SS**  trans-54.8115.2175.2-61.40000109.9K6C4-K6 PolarHBondContact O-N 2.9Å; C4-K6 VanDerWaalsContact O-N 3.14Å
5M48.8Very low41.5Very low185 Ų185155.4 Ų155.491%0.91185%0.846SS**  trans-66.9114.7179.2-65.6170.487.800108.3G3 A7G3-M5 PolarHBondContact O-N 3.2Å; M5-A7 PolarHBondContact O-N 3.46Å
6K47Very low41.2Very low202 Ų202157.3 Ų157.388%0.87885%0.846SS**PPolyproline II helixtrans-63.9122.9169.1-153.4168.4-174.4172.70107.2C4 A8C4-K6 PolarHBondContact O-N 2.9Å; C4-K6 VanDerWaalsContact O-N 3.14Å; K6-A8 PolarHBondContact O-N 3.03Å; K6-A8 VanDerWaalsContact O-N 3.16Å
7A47.9Very low40.6Very low99 Ų99152.5 Ų152.582%0.81884%0.843SS**PPolyproline II helixtrans-59.3121.1176.200000109.2M5M5-A7 PolarHBondContact O-N 3.46Å
8A37.8Very low40.4Very low82 Ų82155.4 Ų155.468%0.67885%0.849SS**PPolyproline II helixtrans-75143.7177.300000109.8K6 M10K6-A8 PolarHBondContact O-N 3.03Å; K6-A8 VanDerWaalsContact O-N 3.16Å; A8-M10 PolarHBondContact O-N 3.1Å
9P42.3Very low39.8Very low123 Ų123151.3 Ų151.380%0.79985%0.846SS**PPolyproline II helixtrans-66.9128.9174.428.1-30.8000108.9K11P9-K11 PolarHBondContact O-N 2.89Å
10M37.2Very low39.6Very low191 Ų191151.7 Ų151.794%0.94185%0.846SS**PPolyproline II helixtrans-67.2116.8175-73.7-16562.900109.3A8A8-M10 PolarHBondContact O-N 3.1Å
11K44.8Very low39.3Very low198 Ų198152.2 Ų152.286%0.86185%0.847SS**PPolyproline II helixtrans-89.6120.2172.8-163.6176.6-176.9-178.70107.7P9 A13P9-K11 PolarHBondContact O-N 2.89Å; K11-A13 PolarHBondContact O-N 2.78Å
12E43.4Very low39.3Very low195 Ų195143.3 Ų143.391%0.91183%0.832SS**PPolyproline II helixtrans-60.8118.5172.4-71177166.500109.4
13A37.1Very low39.1Very low102 Ų102143.6 Ų143.684%0.84383%0.828SS**  trans-110.1100.1172.100000108.3K11K11-A13 PolarHBondContact O-N 2.78Å
14N41.6Very low39.1Very low154 Ų154146.5 Ų146.582%0.82484%0.835SS**  trans-76.4127.4155.6-170.64000107.4
15V35.8Very low38.3Very low127 Ų127146 Ų14677%0.7784%0.838SS**  trans166.8138.7135.2156.70000111.7
16H37.4Very low37.7Very low185 Ų185143.8 Ų143.886%0.85684%0.835SS**  trans-33151.8164-83.130.1000117.1
17G31Very low37Very low76 Ų76144.6 Ų144.678%0.78483%0.833SS**  trans140.4126142.100000116.1
18Q36.5Very low36.4Very low206 Ų206146.5 Ų146.596%0.96384%0.835SS**  trans-50.3154.9179.5-63.2166.8-41.500116.3
19G30.3Very low36.1Very low76 Ų76150.7 Ų150.778%0.78484%0.84SS**  trans148.8112.615000000115.8
20N35.5Very low35.6Very low159 Ų159148.5 Ų148.585%0.8584%0.839SS**  trans-46.6144.5172.8-71.3-34.4000114.7
21L33Very low35.4Very low164 Ų164145.2 Ų145.286%0.85983%0.83SS**  -168.4115.4125.4-125.474.2000113.1
22A32.7Very low34.9Very low97 Ų97143.6 Ų143.680%0.80283%0.83SS**  trans22.9113.1147.200000121.2
23Y32.6Very low34.3Very low224 Ų224142.7 Ų142.788%0.87883%0.826SS**  trans-114.8138.5143.5-79.7-86.7000109.1A25Y23-A25 PolarHBondContact O-N 2.78Å
24P39.8Very low34.1Very low124 Ų124142.5 Ų142.581%0.80582%0.819SS**PPolyproline II helixtrans-76126.9-179.929.1-30.3000111.1
25A31.5Very low33.7Very low96 Ų96142.3 Ų142.379%0.79382%0.822SS**PPolyproline II helixtrans-69.7133.3174.500000111.7Y23 R27Y23-A25 PolarHBondContact O-N 2.78Å; A25-R27 PolarHBondContact O-N 3.44Å
26V36.8Very low33.4Very low139 Ų139143.5 Ų143.584%0.84283%0.825SS**PPolyproline II helixtrans-72.8118.1165.6179.20000107.8T28V26-T28 PolarHBondContact O-N 3.2Å
27R31.6Very low33.1Very low219 Ų219138.1 Ų138.183%0.82682%0.819SS**PPolyproline II helixtrans-65.7121.9175.2-76.9179.9172.1-173.5-2.3110.4A25A25-R27 PolarHBondContact O-N 3.44Å
28T35.4Very low33.6Very low140 Ų140140.5 Ų140.586%0.85982%0.82SS**PPolyproline II helixtrans-89.8123.7155.345.10000108.3V26V26-T28 PolarHBondContact O-N 3.2Å
29H31.6Very low33.8Very low169 Ų169142.7 Ų142.778%0.78282%0.82SS**PPolyproline II helixtrans-94124.2164.3-104.2-90.2000107.8
30G32.1Very low33.8Very low77 Ų77144.2 Ų144.279%0.79483%0.825SS**  trans-176.875.7178.200000109.8
31T33.1Very low33.5Very low122 Ų122140.2 Ų140.275%0.74882%0.822SS**  trans-78.8124.1177.3-46.20000110
32L33.7Very low34.1Very low165 Ų165138 Ų13886%0.86482%0.82SS**  trans-154.1111.8140.5-152.294.2000111
33E31.7Very low34.3Very low176 Ų176145 Ų14582%0.82283%0.825SS**  trans2.5142.1159.2-58.3179.1146.400122.7
34S32Very low34.8Very low98 Ų98138 Ų13869%0.68582%0.821SS**  trans-85137176.41770000112.2
35V32.8Very low34.8Very low149 Ų149140.3 Ų140.390%0.90383%0.826SS**  trans-137.4129.1153.1172.10000109
36N31.1Very low35.1Very low153 Ų153141.3 Ų141.382%0.81882%0.823SS**  trans-93.3139-177.1-92.7-46.1000113.5
37G29.5Very low35.4Very low71 Ų71141.1 Ų141.173%0.73282%0.822SS**  trans109.3158.6139.900000118.5
38P43.1Very low36.1Very low126 Ų126136.4 Ų136.482%0.81882%0.817SS**  cis-134.4157.3-28.137.5-19.8000115.8
39R39.5Very low36.8Very low252 Ų252132.5 Ų132.595%0.95180%0.796SS**  trans28.5116.6153.1-64.5-178.6177.8-179.7-0.7120.9
40A30.6Very low37.8Very low109 Ų109130.6 Ų130.690%0.90179%0.791SS**  trans-167.9142.6133.300000111.7
41G29.1Very low38.8Very low75 Ų75129.7 Ų129.777%0.77378%0.776SS**  trans98.385.2150.400000117.4
42S46Very low39.7Very low116 Ų116128.2 Ų128.281%0.81176%0.763SS**  trans-46.4130.8150.246.50000112.3
43R36.8Very low41Very low245 Ų245124 Ų12493%0.92575%0.745SS**  trans-165.1127.7144.1-103.4156.1-170.8-159.81.2109.1
44G43.5Very low42.5Very low77 Ų77119.9 Ų119.979%0.79472%0.724SS**  trans-58.5137-170.500000112.6
45L38.9Very low43.8Very low173 Ų173118.9 Ų118.991%0.90671%0.709SS**  trans-100.699.3164.3-139.372.1000106.4T47L45-T47 PolarHBondContact O-N 3.37Å
46T39.1Very low45Very low117 Ų117117.6 Ų117.672%0.71869%0.693SS**  trans-52.5130.9168.543.50000109T48T46-T48 PolarHBondContact O-N 2.92Å
47T42.1Very low46.5Very low135 Ų135114 Ų11483%0.82868%0.676SS**  trans-56.198.1165.347.90000108.2L45 S49L45-T47 PolarHBondContact O-N 3.37Å; T47-S49 PolarHBondContact O-N 2.78Å
48T47.2Very low48.2Very low119 Ų119111.2 Ų111.273%0.7364%0.644SS**  trans-64108.6172.942.40000107.6T46T46-T48 PolarHBondContact O-N 2.92Å
49S49.6Very low49Very low59 Ų59109.5 Ų109.541%0.41363%0.625SS.*  trans-70.2139.1-177.1-178.50000109.5T47 A51 D52 T53T47-S49 PolarHBondContact O-N 2.78Å; S49-A51 PolarHBondContact O-N 2.89Å; S49-A51 VanDerWaalsContact O-N 3.11Å; S49-A51 PolarHBondContact OG-N 2.87Å; S49-D52 WeakPolarHBondContact O-CB 3.34Å; S49-D52 PolarHBondContact O-N 2.81Å; S49-T53 PolarHBondContact O-N 3.49Å
50L52.4Low50Low129 Ų129105.1 Ų105.168%0.67562%0.615SS**Hα-helixtrans-55-27.3172.5-85.5139.6000112.6T53 F54 M150L50-T53 WeakPolarHBondContact CA-OG1 3.47Å; L50-T53 PolarHBondContact O-N 2.91Å; L50-T53 PolarHBondContact O-OG1 2.77Å; L50-F54 PolarHBondContact O-N 3.48Å; L50-M150 HydrophobicContact CD2-CE 4.33Å
51A54Low51.4Low58 Ų58102.5 Ų102.548%0.47959%0.586SS.*Hα-helixtrans-65.1-40.8173.500000111.8S49 T53 F54 E55S49-A51 PolarHBondContact O-N 2.89Å; S49-A51 VanDerWaalsContact O-N 3.11Å; S49-A51 PolarHBondContact OG-N 2.87Å; A51-T53 VanDerWaalsContact C-N 3.32Å; A51-T53 PolarHBondContact O-N 3.11Å; A51-F54 PolarHBondContact O-N 3.23Å; A51-E55 WeakPolarHBondContact O-CG 3.31Å; A51-E55 PolarHBondContact O-N 2.87Å
52D50.3Low52.9Low91 Ų91100.9 Ų100.949%0.48756%0.559SS.*Hα-helixtrans-65.6-37.4178.8-70.5-30.3000111.3S49 F54 H56S49-D52 WeakPolarHBondContact O-CB 3.34Å; S49-D52 PolarHBondContact O-N 2.81Å; D52-F54 VanDerWaalsContact C-N 3.33Å; D52-F54 PolarHBondContact O-N 3.37Å; D52-H56 WeakPolarHBondContact O-CB 3.27Å; D52-H56 PolarHBondContact O-N 3.42Å; D52-H56 VanDerWaalsContact O-N 3.07Å; D52-H56 PolarHBondContact O-ND1 2.99Å
53T62.2Low53.1Low77 Ų7799.8 Ų99.847%0.47254%0.544SS..Hα-helixtrans-67-34.4176.749.10000112.7S49 L50 A51 V57S49-T53 PolarHBondContact O-N 3.49Å; L50-T53 WeakPolarHBondContact CA-OG1 3.47Å; L50-T53 PolarHBondContact O-N 2.91Å; L50-T53 PolarHBondContact O-OG1 2.77Å; A51-T53 VanDerWaalsContact C-N 3.32Å; A51-T53 PolarHBondContact O-N 3.11Å; T53-V57 WeakPolarHBondContact O-CG2 3.45Å; T53-V57 PolarHBondContact O-N 2.86Å
54F63.7Low53.9Low88 Ų8894.4 Ų94.439%0.38653%0.53SS..Hα-helixtrans-72.9-44.3179.2178.3-103.6000111.8L50 A51 D52 V57 I58 V161L50-F54 PolarHBondContact O-N 3.48Å; A51-F54 PolarHBondContact O-N 3.23Å; D52-F54 VanDerWaalsContact C-N 3.33Å; D52-F54 PolarHBondContact O-N 3.37Å; F54-V57 PolarHBondContact O-N 2.98Å; F54-I58 HydrophobicContact CD1-CD1 3.79Å; F54-I58 HydrophobicContact CD2-CD1 4.33Å; F54-I58 HydrophobicContact CE1-CD1 3.26Å; F54-I58 HydrophobicContact CE2-CD1 3.85Å; F54-I58 HydrophobicContact CG-CD1 4.32Å; F54-I58 HydrophobicContact CZ-CD1 3.31Å; F54-I58 HydrophobicContact CZ-CG1 4.41Å; F54-I58 WeakPolarHBondContact O-CG1 3.44Å; F54-I58 PolarHBondContact O-N 3.16Å; F54-I58 VanDerWaalsContact O-N 3.13Å; F54-V161 HydrophobicContact CE1-CG1 3.81Å; F54-V161 HydrophobicContact CZ-CG1 4.29Å
55E58.5Low54.1Low78 Ų7897.1 Ų97.136%0.36453%0.526SS..Hα-helixtrans-62.5-42.4177-65.9-63.6158.200111.4A51 V57 I58 E59A51-E55 WeakPolarHBondContact O-CG 3.31Å; A51-E55 PolarHBondContact O-N 2.87Å; E55-V57 PolarHBondContact O-N 3.15Å; E55-I58 PolarHBondContact O-N 3.23Å; E55-E59 WeakPolarHBondContact O-CB 3.38Å; E55-E59 PolarHBondContact O-N 3.07Å
56H57.6Low54.1Low122 Ų12296.6 Ų96.657%0.56552%0.519SS*.Hα-helixtrans-64-40.1176.2-80.177.9000113D52 I58 E59 E60D52-H56 WeakPolarHBondContact O-CB 3.27Å; D52-H56 PolarHBondContact O-N 3.42Å; D52-H56 VanDerWaalsContact O-N 3.07Å; D52-H56 PolarHBondContact O-ND1 2.99Å; H56-I58 VanDerWaalsContact C-N 3.31Å; H56-I58 PolarHBondContact O-N 3.48Å; H56-E59 PolarHBondContact O-N 3.06Å; H56-E60 WeakPolarHBondContact O-CB 3.32Å; H56-E60 PolarHBondContact O-N 3.23Å
57V63.2Low53.9Low76 Ų76100.2 Ų100.246%0.46153%0.525SS..Hα-helixtrans-64.4-38.4178168.10000110.8T53 F54 E55 L61T53-V57 WeakPolarHBondContact O-CG2 3.45Å; T53-V57 PolarHBondContact O-N 2.86Å; F54-V57 PolarHBondContact O-N 2.98Å; E55-V57 PolarHBondContact O-N 3.15Å; V57-L61 HydrophobicContact CG1-CD1 3.99Å; V57-L61 WeakPolarHBondContact O-CB 3.43Å; V57-L61 WeakPolarHBondContact O-CD1 3.46Å; V57-L61 WeakPolarHBondContact O-CG 3.43Å; V57-L61 PolarHBondContact O-N 3.39Å
58I65.5Low53.5Low13 Ų13100.4 Ų100.47%0.06753%0.525CS..Hα-helixtrans-71.6-39.4176.9-65.9168.5000111.3F54 E55 H56 L61 L62 V161 V163F54-I58 HydrophobicContact CD1-CD1 3.79Å; F54-I58 HydrophobicContact CD2-CD1 4.33Å; F54-I58 HydrophobicContact CE1-CD1 3.26Å; F54-I58 HydrophobicContact CE2-CD1 3.85Å; F54-I58 HydrophobicContact CG-CD1 4.32Å; F54-I58 HydrophobicContact CZ-CD1 3.31Å; F54-I58 HydrophobicContact CZ-CG1 4.41Å; F54-I58 WeakPolarHBondContact O-CG1 3.44Å; F54-I58 PolarHBondContact O-N 3.16Å; F54-I58 VanDerWaalsContact O-N 3.13Å; E55-I58 PolarHBondContact O-N 3.23Å; H56-I58 VanDerWaalsContact C-N 3.31Å; H56-I58 PolarHBondContact O-N 3.48Å; I58-L61 PolarHBondContact O-N 2.75Å; I58-L62 HydrophobicContact CG2-CD1 3.56Å; I58-L62 HydrophobicContact CG2-CG 4.08Å; I58-L62 WeakPolarHBondContact O-CB 3.46Å; I58-L62 VanDerWaalsContact O-CG 3.25Å; I58-L62 WeakPolarHBondContact O-CG 3.48Å; I58-L62 PolarHBondContact O-N 3.34Å; I58-V161 HydrophobicContact CD1-CG1 4.07Å; I58-V163 HydrophobicContact CG2-CB 4.33Å; I58-V163 HydrophobicContact CG2-CG1 3.52Å
59E59.9Low52.9Low91 Ų91105.8 Ų105.843%0.42553%0.532SS..Hα-helixtrans-62.4-45.3178.6-167.9170-161.900111.7E55 H56 L61 L62 D63E55-E59 WeakPolarHBondContact O-CB 3.38Å; E55-E59 PolarHBondContact O-N 3.07Å; H56-E59 PolarHBondContact O-N 3.06Å; E59-L61 VanDerWaalsContact C-N 3.32Å; E59-L61 PolarHBondContact O-N 3.14Å; E59-L62 PolarHBondContact O-N 3.18Å; E59-D63 PolarHBondContact O-N 3.43Å; E59-D63 VanDerWaalsContact O-N 3.12Å
60E60.1Low52.8Low159 Ų159108.8 Ų108.874%0.74355%0.551SS**Hα-helixtrans-59.9-40174.5-173.3175.1-171.200112.3H56 L62H56-E60 WeakPolarHBondContact O-CB 3.32Å; H56-E60 PolarHBondContact O-N 3.23Å; E60-L62 VanDerWaalsContact C-N 3.34Å; E60-L62 PolarHBondContact O-N 3.43Å
61L60.3Low52.2Low54 Ų54110 Ų11028%0.28356%0.558SS.*Hα-helixtrans-74.9-21.1179.4-68.4171.7000113.9V57 I58 E59 D79 L80 L87V57-L61 HydrophobicContact CG1-CD1 3.99Å; V57-L61 WeakPolarHBondContact O-CB 3.43Å; V57-L61 WeakPolarHBondContact O-CD1 3.46Å; V57-L61 WeakPolarHBondContact O-CG 3.43Å; V57-L61 PolarHBondContact O-N 3.39Å; I58-L61 PolarHBondContact O-N 2.75Å; E59-L61 VanDerWaalsContact C-N 3.32Å; E59-L61 PolarHBondContact O-N 3.14Å; L61-D79 HydrophobicContact CD2-CB 4.41Å; L61-D79 WeakPolarHBondContact CD2-O 3.12Å; L61-L80 HydrophobicContact CB-CD2 4.48Å; L61-L80 HydrophobicContact CD2-CD2 4.47Å; L61-L87 HydrophobicContact CB-CD1 3.71Å; L61-L87 HydrophobicContact CD1-CD1 3.87Å; L61-L87 HydrophobicContact CG-CD1 4.42Å
62L60.1Low51.5Low41 Ų41114.5 Ų114.522%0.21557%0.569CS.*Hα-helixtrans-95.7-15.6-179.2-69.5178.3000113I58 E59 E60 E64 L87 V163 K165I58-L62 HydrophobicContact CG2-CD1 3.56Å; I58-L62 HydrophobicContact CG2-CG 4.08Å; I58-L62 WeakPolarHBondContact O-CB 3.46Å; I58-L62 VanDerWaalsContact O-CG 3.25Å; I58-L62 WeakPolarHBondContact O-CG 3.48Å; I58-L62 PolarHBondContact O-N 3.34Å; E59-L62 PolarHBondContact O-N 3.18Å; E60-L62 VanDerWaalsContact C-N 3.34Å; E60-L62 PolarHBondContact O-N 3.43Å; L62-E64 PolarHBondContact O-N 3.48Å; L62-L87 HydrophobicContact CD2-CD1 4.45Å; L62-V163 HydrophobicContact CD1-CB 3.71Å; L62-V163 HydrophobicContact CD1-CG1 3.98Å; L62-V163 HydrophobicContact CD1-CG2 3.93Å; L62-K165 PolarHBondContact O-NZ 3.13Å
63D51.1Low51.5Low93 Ų93119.3 Ų119.350%0.49759%0.589SS.*  trans-87.776.4-178.3-79-19.6000113.6E59 K165E59-D63 PolarHBondContact O-N 3.43Å; E59-D63 VanDerWaalsContact O-N 3.12Å; D63-K165 IonicContact OD1-NZ 2.66Å
64E52.9Low50.7Low133 Ų133122 Ų12262%0.62160%0.6SS**  trans-135.5109.9148-83.3-14413300110.9L62 K76L62-E64 PolarHBondContact O-N 3.48Å; E64-K76 IonicContact OE1-NZ 2.6Å; E64-K76 PolarHBondContact OE1-NZ 2.98Å; E64-K76 WeakPolarHBondContact OE2-CD 3.4Å; E64-K76 WeakPolarHBondContact OE2-CE 3.48Å; E64-K76 IonicContact OE2-NZ 3.41Å; E64-K76 PolarHBondContact OE2-NZ 3.32Å
65D47.4Very low49.9Very low134 Ų134124.2 Ų124.272%0.71761%0.611SS**  trans-143131.2141.5-162.729.6000112
66Q38.8Very low49.6Very low161 Ų161126.3 Ų126.375%0.75262%0.619SS**  trans82.8100.8158.3-109.6156.575.300121.1
67K35.5Very low49.2Very low193 Ų193125.2 Ų125.284%0.83962%0.617SS**  163.4141.886.2-159.8173.7-175176.80112.3
68V34.2Very low48.5Very low139 Ų139124.3 Ų124.384%0.84262%0.618SS**  trans103.2138.8166.1-166.90000116.2
69R33.3Very low47.9Very low232 Ų232129.2 Ų129.288%0.87564%0.644SS**  trans-92.3-170.2-155.3-52.4171.7168.6171.4-5.1114
70P48.3Very low48.1Very low123 Ų123127.5 Ų127.580%0.79964%0.638SS**  -92.4171.2-99.937.8-22.2000112.2
71N39.1Very low48.3Very low154 Ų154125.7 Ų125.782%0.82463%0.625SS**  trans94.586.4176.9-160.152.3000113.6
72E40Very low48.9Very low153 Ų153126.9 Ų126.972%0.71564%0.635SS**  trans-178.766.6147.1-85.2-107.3145.100105.1
73E50.3Low49.5Very low192 Ų192130.3 Ų130.390%0.89766%0.662SS**THydrogen-bonded Turntrans-67.5136164.5-75-178.6154.200107.3
74N44.2Very low50.9Low132 Ų132137.2 Ų137.271%0.70668%0.681SS**THydrogen-bonded Turntrans109.7-3.4161.8-147.523.2000119.1
75H48.3Very low52.4Low136 Ų136134.7 Ų134.763%0.6368%0.675SS**SBendtrans-101.4-24.4177.3-86.1-67.5000115.8
76K50.9Low54.2Low121 Ų121131.5 Ų131.553%0.52666%0.656SS.*Hα-helixtrans-83.5-27.5-176-65.7-177.6169-166.80114.2E64 A78E64-K76 IonicContact OE1-NZ 2.6Å; E64-K76 PolarHBondContact OE1-NZ 2.98Å; E64-K76 WeakPolarHBondContact OE2-CD 3.4Å; E64-K76 WeakPolarHBondContact OE2-CE 3.48Å; E64-K76 IonicContact OE2-NZ 3.41Å; E64-K76 PolarHBondContact OE2-NZ 3.32Å; K76-A78 PolarHBondContact O-N 3.46Å
77D49.6Very low56.3Low99 Ų99125.5 Ų125.553%0.52963%0.629SS.*Hα-helixtrans-66.6-32.9177.5-67.8-42.2000110.8D79 L80 Y81D77-D79 VanDerWaalsContact C-N 3.31Å; D77-D79 PolarHBondContact O-N 3.41Å; D77-L80 PolarHBondContact O-N 2.8Å; D77-Y81 WeakPolarHBondContact O-CD2 3.45Å; D77-Y81 WeakPolarHBondContact O-CE2 3.16Å
78A49.3Very low58.4Low57 Ų57119.8 Ų119.847%0.47161%0.614SS.*Hα-helixtrans-63-33.9-177.100000113.3K76 L80 Y81K76-A78 PolarHBondContact O-N 3.46Å; A78-L80 VanDerWaalsContact C-N 3.28Å; A78-L80 PolarHBondContact O-N 2.95Å; A78-Y81 PolarHBondContact O-N 3.31Å; A78-Y81 VanDerWaalsContact O-N 3.11Å
79D53.5Low60.6Low116 Ų116119 Ų11962%0.6261%0.614SS**Hα-helixtrans-71-24.4-177.1-65.3-30.6000112.4L61 D77 Y81L61-D79 HydrophobicContact CD2-CB 4.41Å; L61-D79 WeakPolarHBondContact CD2-O 3.12Å; D77-D79 VanDerWaalsContact C-N 3.31Å; D77-D79 PolarHBondContact O-N 3.41Å; D79-Y81 PolarHBondContact O-N 2.6Å
80L62.9Low62.7Low56 Ų56115 Ų11529%0.29361%0.606SS.*THydrogen-bonded Turntrans-71.7-8173.2-61.6173.6000113.4L61 D77 A78 M86 L87L61-L80 HydrophobicContact CB-CD2 4.48Å; L61-L80 HydrophobicContact CD2-CD2 4.47Å; D77-L80 PolarHBondContact O-N 2.8Å; A78-L80 VanDerWaalsContact C-N 3.28Å; A78-L80 PolarHBondContact O-N 2.95Å; L80-M86 WeakPolarHBondContact O-CA 3.46Å; L80-L87 HydrophobicContact CD2-CB 4.37Å; L80-L87 HydrophobicContact CD2-CD1 4.38Å; L80-L87 PolarHBondContact O-N 2.87Å
81Y65.3Low64.1Low120 Ų120113 Ų11347%0.47159%0.591SS.*EExtended strand (participates in β ladder)trans-118.694-179.8-56.3-90.4000111D77 A78 D79 M86D77-Y81 WeakPolarHBondContact O-CD2 3.45Å; D77-Y81 WeakPolarHBondContact O-CE2 3.16Å; A78-Y81 PolarHBondContact O-N 3.31Å; A78-Y81 VanDerWaalsContact O-N 3.11Å; D79-Y81 PolarHBondContact O-N 2.6Å; Y81-M86 HydrophobicContact CD1-CB 4.16Å; Y81-M86 HydrophobicContact CD1-CG 3.59Å; Y81-M86 HydrophobicContact CD1-SD 3.75Å; Y81-M86 HydrophobicContact CE1-CG 3.59Å; Y81-M86 HydrophobicContact CE1-SD 3.39Å; Y81-M86 WeakPolarHBondContact CE1-SD 3.48Å
82T71.4Confident65.7Low80 Ų80107 Ų10749%0.49156%0.56SS.*EExtended strand (participates in β ladder)trans-87.6152.1159.5177.70000109.4R84 V85T82-R84 PolarHBondContact O-N 3.07Å; T82-V85 HydrophobicContact CG2-CB 3.57Å; T82-V85 HydrophobicContact CG2-CG2 4.3Å; T82-V85 WeakPolarHBondContact CG2-O 3.42Å; T82-V85 PolarHBondContact N-O 2.91Å; T82-V85 PolarHBondContact O-N 3.11Å; T82-V85 VanDerWaalsContact O-N 3.08Å
83S72.8Confident66.9Low113 Ų113107.2 Ų107.279%0.7957%0.566SS**THydrogen-bonded Turntrans-55.8-16-172.1-50.50000114.9
84R81.7Confident67.5Low238 Ų238105.1 Ų105.190%0.89856%0.556SS**THydrogen-bonded Turntrans-117.6-16.2179.4-62.6-179-175.8-87.9-0.5114.7T82T82-R84 PolarHBondContact O-N 3.07Å
85V84.3Confident68.3Low80 Ų80101.9 Ų101.949%0.48554%0.542SS..EExtended strand (participates in β ladder)trans-141.2133.4-172.4-174.60000109T82T82-V85 HydrophobicContact CG2-CB 3.57Å; T82-V85 HydrophobicContact CG2-CG2 4.3Å; T82-V85 WeakPolarHBondContact CG2-O 3.42Å; T82-V85 PolarHBondContact N-O 2.91Å; T82-V85 PolarHBondContact O-N 3.11Å; T82-V85 VanDerWaalsContact O-N 3.08Å
86M83.8Confident69Low66 Ų6697 Ų9733%0.32552%0.522SS..EExtended strand (participates in β ladder)trans-130.5134.2178.8168.3-174.264.900108.4L80 Y81 W138L80-M86 WeakPolarHBondContact O-CA 3.46Å; Y81-M86 HydrophobicContact CD1-CB 4.16Å; Y81-M86 HydrophobicContact CD1-CG 3.59Å; Y81-M86 HydrophobicContact CD1-SD 3.75Å; Y81-M86 HydrophobicContact CE1-CG 3.59Å; Y81-M86 HydrophobicContact CE1-SD 3.39Å; Y81-M86 WeakPolarHBondContact CE1-SD 3.48Å; M86-W138 HydrophobicContact CE-CH2 4.28Å
87L84.3Confident69.4Low36 Ų3694.6 Ų94.619%0.18852%0.515CS..  trans-94.9132.9168.4-62.1-178.8000109.4L61 L62 L80 L168L61-L87 HydrophobicContact CB-CD1 3.71Å; L61-L87 HydrophobicContact CD1-CD1 3.87Å; L61-L87 HydrophobicContact CG-CD1 4.42Å; L62-L87 HydrophobicContact CD2-CD1 4.45Å; L80-L87 HydrophobicContact CD2-CB 4.37Å; L80-L87 HydrophobicContact CD2-CD1 4.38Å; L80-L87 PolarHBondContact O-N 2.87Å; L87-L168 HydrophobicContact CD2-CD1 4.06Å
88S80Confident69.5Low73 Ų7395 Ų9551%0.5152%0.516SS..  trans-142.3143.6178.4177.90000110.7Q90S88-Q90 VanDerWaalsContact C-N 3.29Å; S88-Q90 PolarHBondContact OG-N 3.06Å; S88-Q90 VanDerWaalsContact OG-N 3.13Å; S88-Q90 PolarHBondContact OG-O 2.96Å; S88-Q90 VanDerWaalsContact OG-O 3.1Å
89S79.7Confident69.7Low123 Ų12399.1 Ų99.186%0.8652%0.524SS*.SBendtrans-79.8-12.9172.858.10000112.9
90Q78Confident69.7Low147 Ų14796.8 Ų96.869%0.68751%0.511SS*.SBendtrans-112.9146.5-178.6-63.4179.93500110.9S88S88-Q90 VanDerWaalsContact C-N 3.29Å; S88-Q90 PolarHBondContact OG-N 3.06Å; S88-Q90 VanDerWaalsContact OG-N 3.13Å; S88-Q90 PolarHBondContact OG-O 2.96Å; S88-Q90 VanDerWaalsContact OG-O 3.1Å
91V77.3Confident69.3Low80 Ų80101.2 Ų101.249%0.48553%0.534SS..  trans-64.9125.5171-179.30000107.5L93 Y171V91-L93 PolarHBondContact O-N 3.35Å; V91-L93 VanDerWaalsContact O-N 3.09Å; V91-Y171 HydrophobicContact CG1-CE1 4.45Å
92P71.8Confident68.8Low29 Ų29102.3 Ų102.319%0.18854%0.544CS..  trans-69115-178.328.4-34000109.4W138P92-W138 HydrophobicContact CB-CD2 4.12Å; P92-W138 HydrophobicContact CB-CH2 3.81Å; P92-W138 HydrophobicContact CB-CZ2 3.2Å; P92-W138 HydrophobicContact CB-CZ3 4.46Å; P92-W138 HydrophobicContact CG-CD2 3.68Å; P92-W138 VanDerWaalsContact CG-CE2 3.49Å; P92-W138 HydrophobicContact CG-CE3 3.85Å; P92-W138 HydrophobicContact CG-CG 4.34Å; P92-W138 HydrophobicContact CG-CH2 3.66Å; P92-W138 HydrophobicContact CG-CZ2 3.48Å; P92-W138 VanDerWaalsContact CG-CZ2 3.48Å; P92-W138 HydrophobicContact CG-CZ3 3.84Å
93L66.3Low68Low158 Ų158102.4 Ų102.483%0.82754%0.539SS*.  trans-85.7-27.1179.3-61.6178.4000111.7V91V91-L93 PolarHBondContact O-N 3.35Å; V91-L93 VanDerWaalsContact O-N 3.09Å
94E62.2Low67.1Low148 Ų148103.4 Ų103.469%0.69253%0.526SS*.SBendtrans-119.7147.9-178.9-70.6-177.1169.300110.8W138E94-W138 PolarHBondContact O-NE1 3.26Å
95P61.8Low65.8Low64 Ų6498.4 Ų98.442%0.41651%0.511SS..PPolyproline II helixtrans-51.9136.6168.820.2-33.3000111.8L97 Y173P95-L97 PolarHBondContact O-N 3.06Å; P95-Y173 HydrophobicContact CB-CD2 4.29Å; P95-Y173 HydrophobicContact CB-CE1 4.36Å; P95-Y173 HydrophobicContact CB-CE2 3.23Å; P95-Y173 WeakPolarHBondContact CB-OH 3.28Å
96P62.7Low64.6Low33 Ų3399 Ų9921%0.21451%0.511CS..PPolyproline II helixtrans-65135.9167.829.4-25.9000107.9L98 L100 W138 Y173P96-L98 PolarHBondContact O-N 3.29Å; P96-L100 HydrophobicContact CB-CD2 4.36Å; P96-W138 VanDerWaalsContact CD-CZ2 3.45Å; P96-W138 HydrophobicContact CG-CH2 4.2Å; P96-W138 HydrophobicContact CG-CZ2 4.09Å; P96-Y173 VanDerWaalsContact CD-CD1 3.47Å; P96-Y173 VanDerWaalsContact CD-CD2 3.46Å; P96-Y173 HydrophobicContact CG-CD1 3.52Å; P96-Y173 HydrophobicContact CG-CD2 4.33Å; P96-Y173 HydrophobicContact CG-CE1 3.91Å; P96-Y173 HydrophobicContact CG-CG 3.73Å
97L58.1Low63.3Low70 Ų70102.3 Ų102.337%0.36652%0.521SS..PPolyproline II helixtrans-60.1125.1177.5-57.9179.8000108.3P95 F99 L100 E103 Y107P95-L97 PolarHBondContact O-N 3.06Å; L97-F99 PolarHBondContact O-N 3.24Å; L97-L100 PolarHBondContact O-N 3.38Å; L97-E103 HydrophobicContact CB-CB 4.45Å; L97-E103 HydrophobicContact CD1-CB 4.44Å; L97-Y107 HydrophobicContact CD1-CG 4.36Å
98L52.5Low61.9Low107 Ų107104.4 Ų104.456%0.5653%0.532SS*.SBendtrans-61.2-12.3-170.8-72.8171.3000113.2P96 Y173P96-L98 PolarHBondContact O-N 3.29Å; L98-Y173 HydrophobicContact CD2-CE1 3.76Å; L98-Y173 HydrophobicContact CG-CE1 4.45Å
99F53.4Low61Low144 Ų144104.9 Ų104.963%0.63253%0.529SS*.SBendtrans-123.972.8170.4-60.8-81.3000109.8L97 L101 E102 E103L97-F99 PolarHBondContact O-N 3.24Å; F99-L101 PolarHBondContact O-N 3.19Å; F99-E102 PolarHBondContact O-N 3.12Å; F99-E103 HydrophobicContact CB-CB 4.19Å; F99-E103 VanDerWaalsContact O-CB 3.26Å; F99-E103 WeakPolarHBondContact O-CB 3.22Å; F99-E103 PolarHBondContact O-N 3.49Å
100L53.1Low59.9Low67 Ų67100 Ų10035%0.35150%0.496SS..THydrogen-bonded Turntrans-48.9-23.1-174-84169.5000115.8P96 L97 Y104P96-L100 HydrophobicContact CB-CD2 4.36Å; L97-L100 PolarHBondContact O-N 3.38Å; L100-Y104 WeakPolarHBondContact O-CB 3.37Å
101L55.6Low58.9Low149 Ų14995.2 Ų95.278%0.7848%0.481SS*.THydrogen-bonded Turntrans-103.5-51.7-176.7-72.3159.9000112.3F99 K105F99-L101 PolarHBondContact O-N 3.19Å; L101-K105 PolarHBondContact O-N 3.02Å
102E54.5Low58.2Low143 Ų14398.3 Ų98.367%0.66850%0.495SS*.Hα-helixtrans-67.9-41.6-178.5-149.473.6-148.100111.2F99 N106F99-E102 PolarHBondContact O-N 3.12Å; E102-N106 PolarHBondContact O-N 3.19Å; E102-N106 PolarHBondContact O-ND2 2.98Å
103E54.5Low57.7Low83 Ų83100.6 Ų100.639%0.38851%0.505SS..Hα-helixtrans-87.8-24.5-174.6-143.2162.4-140.200112.1L97 F99 N106 Y107L97-E103 HydrophobicContact CB-CB 4.45Å; L97-E103 HydrophobicContact CD1-CB 4.44Å; F99-E103 HydrophobicContact CB-CB 4.19Å; F99-E103 VanDerWaalsContact O-CB 3.26Å; F99-E103 WeakPolarHBondContact O-CB 3.22Å; F99-E103 PolarHBondContact O-N 3.49Å; E103-N106 CarbonylContact O-C 3.5Å; E103-N106 PolarHBondContact O-N 2.66Å; E103-Y107 WeakPolarHBondContact O-CA 3.45Å; E103-Y107 WeakPolarHBondContact O-CB 3.14Å; E103-Y107 PolarHBondContact O-N 2.93Å
104Y53.5Low57.9Low133 Ų13396.5 Ų96.552%0.52249%0.489SS..Hα-helixtrans-67.3-41.8169.7179.6-106.1000111.7L100 Y107 L108L100-Y104 WeakPolarHBondContact O-CB 3.37Å; Y104-Y107 PolarHBondContact O-N 3.5Å; Y104-L108 HydrophobicContact CD1-CD1 3.77Å; Y104-L108 HydrophobicContact CD1-CG 4.19Å; Y104-L108 HydrophobicContact CD2-CG 4.4Å; Y104-L108 HydrophobicContact CE1-CD1 3.22Å; Y104-L108 HydrophobicContact CE1-CG 3.88Å; Y104-L108 HydrophobicContact CE2-CD1 4.28Å; Y104-L108 HydrophobicContact CE2-CD2 4.18Å; Y104-L108 HydrophobicContact CE2-CG 4.1Å; Y104-L108 HydrophobicContact CG-CD1 4.5Å; Y104-L108 HydrophobicContact CG-CG 4.44Å; Y104-L108 WeakPolarHBondContact O-CB 3.33Å; Y104-L108 WeakPolarHBondContact O-CG 3.13Å; Y104-L108 PolarHBondContact O-N 2.78Å
105K54.5Low57.9Low134 Ų13495.1 Ų95.158%0.58348%0.484SS*.Hα-helixtrans-61.4-46.6172.6-169.1-174.7174.475.10110.6L101 Y107 L108 D109L101-K105 PolarHBondContact O-N 3.02Å; K105-Y107 VanDerWaalsContact C-N 3.32Å; K105-Y107 PolarHBondContact O-N 2.87Å; K105-L108 PolarHBondContact O-N 2.72Å; K105-D109 VanDerWaalsContact O-CB 3.28Å; K105-D109 WeakPolarHBondContact O-CB 3.48Å; K105-D109 PolarHBondContact O-N 2.8Å
106N59Low58.3Low93 Ų93101.4 Ų101.450%0.49750%0.499SS..Hα-helixtrans-63.6-34.6175.4-67.8-30.8000112.9E102 E103 A110E102-N106 PolarHBondContact O-N 3.19Å; E102-N106 PolarHBondContact O-ND2 2.98Å; E103-N106 CarbonylContact O-C 3.5Å; E103-N106 PolarHBondContact O-N 2.66Å; N106-A110 WeakPolarHBondContact O-CB 3.43Å; N106-A110 PolarHBondContact O-N 3.08Å
107Y55.6Low58.5Low134 Ų134102.9 Ų102.953%0.52551%0.508SS..Hα-helixtrans-74.3-41.8177.7179.1-96.3000112L97 E103 Y104 K105 D109 A110 A111L97-Y107 HydrophobicContact CD1-CG 4.36Å; E103-Y107 WeakPolarHBondContact O-CA 3.45Å; E103-Y107 WeakPolarHBondContact O-CB 3.14Å; E103-Y107 PolarHBondContact O-N 2.93Å; Y104-Y107 PolarHBondContact O-N 3.5Å; K105-Y107 VanDerWaalsContact C-N 3.32Å; K105-Y107 PolarHBondContact O-N 2.87Å; Y107-D109 VanDerWaalsContact C-N 3.33Å; Y107-A110 CarbonylContact O-C 3.48Å; Y107-A110 PolarHBondContact O-N 3.4Å; Y107-A111 WeakPolarHBondContact O-CB 3.36Å; Y107-A111 PolarHBondContact O-N 3.21Å
108L56.5Low58.7Low80 Ų80104 Ų10442%0.41951%0.507SS..Hα-helixtrans-62.7-43.3172-74.3-176.7000110.7Y104 K105 A110 A111 N112Y104-L108 HydrophobicContact CD1-CD1 3.77Å; Y104-L108 HydrophobicContact CD1-CG 4.19Å; Y104-L108 HydrophobicContact CD2-CG 4.4Å; Y104-L108 HydrophobicContact CE1-CD1 3.22Å; Y104-L108 HydrophobicContact CE1-CG 3.88Å; Y104-L108 HydrophobicContact CE2-CD1 4.28Å; Y104-L108 HydrophobicContact CE2-CD2 4.18Å; Y104-L108 HydrophobicContact CE2-CG 4.1Å; Y104-L108 HydrophobicContact CG-CD1 4.5Å; Y104-L108 HydrophobicContact CG-CG 4.44Å; Y104-L108 WeakPolarHBondContact O-CB 3.33Å; Y104-L108 WeakPolarHBondContact O-CG 3.13Å; Y104-L108 PolarHBondContact O-N 2.78Å; K105-L108 PolarHBondContact O-N 2.72Å; L108-A110 VanDerWaalsContact C-N 3.32Å; L108-A110 PolarHBondContact O-N 3.22Å; L108-A111 PolarHBondContact O-N 3.25Å; L108-N112 PolarHBondContact O-N 2.87Å; L108-N112 VanDerWaalsContact O-N 3.09Å
109D60.3Low59Low83 Ų83106.6 Ų106.644%0.44451%0.509SS..Hα-helixtrans-61.5-41.8173.6-73.4-19.2000110.4K105 Y107 N112 M113K105-D109 VanDerWaalsContact O-CB 3.28Å; K105-D109 WeakPolarHBondContact O-CB 3.48Å; K105-D109 PolarHBondContact O-N 2.8Å; Y107-D109 VanDerWaalsContact C-N 3.33Å; D109-N112 PolarHBondContact O-N 3.49Å; D109-M113 WeakPolarHBondContact O-CG 3.25Å; D109-M113 PolarHBondContact O-N 3.25Å
110A57.5Low59.3Low20 Ų20106.2 Ų106.217%0.16551%0.509CS..Hα-helixtrans-72.5-31.2176.100000114N106 Y107 L108 N112 M113 R118N106-A110 WeakPolarHBondContact O-CB 3.43Å; N106-A110 PolarHBondContact O-N 3.08Å; Y107-A110 CarbonylContact O-C 3.48Å; Y107-A110 PolarHBondContact O-N 3.4Å; L108-A110 VanDerWaalsContact C-N 3.32Å; L108-A110 PolarHBondContact O-N 3.22Å; A110-N112 PolarHBondContact O-N 2.81Å; A110-M113 WeakPolarHBondContact O-CB 3.36Å; A110-M113 PolarHBondContact O-N 3.2Å; A110-R118 WeakPolarHBondContact O-CD 3.44Å; A110-R118 WeakPolarHBondContact O-CG 3.15Å; A110-R118 PolarHBondContact O-NE 3.02Å
111A56.7Low59.4Low47 Ų47105.2 Ų105.239%0.38851%0.508SS..Hα-helixtrans-66.9-28.8174.100000110.3Y107 L108 R118Y107-A111 WeakPolarHBondContact O-CB 3.36Å; Y107-A111 PolarHBondContact O-N 3.21Å; L108-A111 PolarHBondContact O-N 3.25Å; A111-R118 PolarHBondContact O-NH2 3.13Å
112N61.9Low59.4Low145 Ų145101.4 Ų101.478%0.77549%0.488SS*.THydrogen-bonded Turntrans-82-9.1170.9-157.3-0.3000113.6L108 D109 A110L108-N112 PolarHBondContact O-N 2.87Å; L108-N112 VanDerWaalsContact O-N 3.09Å; D109-N112 PolarHBondContact O-N 3.49Å; A110-N112 PolarHBondContact O-N 2.81Å
113M62.4Low59.7Low78 Ų7897.9 Ų97.938%0.38448%0.478SS..SBendtrans-81.3148.7178.4-71.7-176.9-170.600112.8D109 A110 V117 R118D109-M113 WeakPolarHBondContact O-CG 3.25Å; D109-M113 PolarHBondContact O-N 3.25Å; A110-M113 WeakPolarHBondContact O-CB 3.36Å; A110-M113 PolarHBondContact O-N 3.2Å; M113-V117 HydrophobicContact CB-CB 4.03Å; M113-V117 HydrophobicContact CB-CG1 3.92Å; M113-V117 HydrophobicContact CG-CG1 3.98Å; M113-V117 HydrophobicContact SD-CB 4.42Å; M113-V117 HydrophobicContact SD-CG1 3.32Å; M113-V117 WeakPolarHBondContact SD-CG1 3.47Å; M113-R118 HydrophobicContact CB-CG 4.26Å; M113-R118 PolarHBondContact O-NE 2.91Å; M113-R118 PolarHBondContact O-NH1 2.83Å; M113-R118 PolarHBondContact O-NH2 3.09Å
114S70Confident59.9Low71 Ų7197.4 Ų97.450%0.49749%0.488SS..  trans-60.8153.4175.873.30000112.4R116 V117 R118S114-R116 PolarHBondContact O-N 2.76Å; S114-V117 PolarHBondContact O-N 2.89Å; S114-V117 WeakPolarHBondContact OG-CG2 3.09Å; S114-R118 PolarHBondContact O-N 3.19Å
115M62.6Low60Low119 Ų11999.2 Ų99.259%0.58649%0.494SS*.Hα-helixtrans-50.2-29.5175.5-77.9-65.9-70.200113.9R118 R119M115-R118 PolarHBondContact SD-NH1 3.1Å; M115-R119 WeakPolarHBondContact O-CG 3.45Å
116R69.4Low60.4Low197 Ų197101.1 Ų101.174%0.74350%0.497SS*.Hα-helixtrans-70.2-42.3176-177.9-179.7-72.1173.1-2.7111.6S114 H120S114-R116 PolarHBondContact O-N 2.76Å; R116-H120 PolarHBondContact O-CD2 2.75Å; R116-H120 VanDerWaalsContact O-CD2 3.29Å
117V66.4Low60.3Low64 Ų6499.2 Ų99.239%0.38850%0.5SS..Hα-helixtrans-73.4-39.5-178.5177.50000110.8M113 S114 R119 H120 S121M113-V117 HydrophobicContact CB-CB 4.03Å; M113-V117 HydrophobicContact CB-CG1 3.92Å; M113-V117 HydrophobicContact CG-CG1 3.98Å; M113-V117 HydrophobicContact SD-CB 4.42Å; M113-V117 HydrophobicContact SD-CG1 3.32Å; M113-V117 WeakPolarHBondContact SD-CG1 3.47Å; S114-V117 PolarHBondContact O-N 2.89Å; S114-V117 WeakPolarHBondContact OG-CG2 3.09Å; V117-R119 PolarHBondContact O-N 3.34Å; V117-H120 WeakPolarHBondContact O-CA 3.42Å; V117-H120 PolarHBondContact O-N 3.11Å; V117-S121 PolarHBondContact O-N 3.01Å
118R62.5Low60.9Low93 Ų9398.9 Ų98.935%0.35150%0.503SS..Hα-helixtrans-57.8-34.1175.5-63.5-168-157.7104.7-3.6113.7A110 A111 M113 S114 M115 H120 S121A110-R118 WeakPolarHBondContact O-CD 3.44Å; A110-R118 WeakPolarHBondContact O-CG 3.15Å; A110-R118 PolarHBondContact O-NE 3.02Å; A111-R118 PolarHBondContact O-NH2 3.13Å; M113-R118 HydrophobicContact CB-CG 4.26Å; M113-R118 PolarHBondContact O-NE 2.91Å; M113-R118 PolarHBondContact O-NH1 2.83Å; M113-R118 PolarHBondContact O-NH2 3.09Å; S114-R118 PolarHBondContact O-N 3.19Å; M115-R118 PolarHBondContact SD-NH1 3.1Å; R118-H120 PolarHBondContact O-N 3.47Å; R118-S121 WeakPolarHBondContact CA-OG 3.23Å; R118-S121 PolarHBondContact O-N 3.47Å; R118-S121 PolarHBondContact O-OG 2.73Å
119R59Low61.7Low161 Ų16199.5 Ų99.561%0.60851%0.506SS*.THydrogen-bonded Turntrans-69.3-18176.2-72.1177.2-174.7166.82113.8M115 V117 R125M115-R119 WeakPolarHBondContact O-CG 3.45Å; V117-R119 PolarHBondContact O-N 3.34Å; R119-R125 PolarHBondContact O-NH1 3.38Å
120H59.2Low62.6Low137 Ų13798.6 Ų98.663%0.63451%0.506SS*.THydrogen-bonded Turntrans-97.5-16176.1-75.2-70.3000113.2R116 V117 R118R116-H120 PolarHBondContact O-CD2 2.75Å; R116-H120 VanDerWaalsContact O-CD2 3.29Å; V117-H120 WeakPolarHBondContact O-CA 3.42Å; V117-H120 PolarHBondContact O-N 3.11Å; R118-H120 PolarHBondContact O-N 3.47Å
121S55.6Low63.9Low46 Ų46102.1 Ų102.132%0.32253%0.526SS..  trans-90.5-3.2177.761.50000113.8V117 R118 P123V117-S121 PolarHBondContact O-N 3.01Å; R118-S121 WeakPolarHBondContact CA-OG 3.23Å; R118-S121 PolarHBondContact O-N 3.47Å; R118-S121 PolarHBondContact O-OG 2.73Å; S121-P123 WeakPolarHBondContact O-CD 3.29Å; S121-P123 VanDerWaalsContact O-N 3.12Å
122D56.3Low65.2Low69 Ų69102.7 Ų102.737%0.36953%0.526SS..  trans-58.3111.4173.1-178.4-6.3000109.8A124 R125 R126D122-A124 PolarHBondContact O-N 3.31Å; D122-A124 WeakPolarHBondContact OD1-CB 3.45Å; D122-A124 PolarHBondContact OD1-N 3.41Å; D122-A124 VanDerWaalsContact OD1-N 3.08Å; D122-R125 HydrophobicContact CB-CB 4.24Å; D122-R125 HydrophobicContact CB-CG 4.06Å; D122-R125 PolarHBondContact O-N 3.47Å; D122-R126 PolarHBondContact O-N 2.68Å; D122-R126 VanDerWaalsContact O-N 3.13Å
123P59.9Low66.2Low69 Ų6997.8 Ų97.845%0.44850%0.5SS..Hα-helixtrans-57.3-33.4-177-24.735.4000112.5S121 R125 R126 G127 E128S121-P123 WeakPolarHBondContact O-CD 3.29Å; S121-P123 VanDerWaalsContact O-N 3.12Å; P123-R125 PolarHBondContact O-N 3.22Å; P123-R126 PolarHBondContact O-N 3.2Å; P123-R126 VanDerWaalsContact O-N 3.09Å; P123-G127 PolarHBondContact O-N 2.93Å; P123-E128 PolarHBondContact O-N 2.66Å
124A58.4Low67.3Low72 Ų7297.2 Ų97.260%0.59550%0.504SS*.Hα-helixtrans-64.9-27.7177.700000112.3D122D122-A124 PolarHBondContact O-N 3.31Å; D122-A124 WeakPolarHBondContact OD1-CB 3.45Å; D122-A124 PolarHBondContact OD1-N 3.41Å; D122-A124 VanDerWaalsContact OD1-N 3.08Å
125R56.7Low68Low172 Ų17297.9 Ų97.965%0.64950%0.501SS*.Hα-helixtrans-90.7-16.1175.6-60.2-173.876.3-151.94.2113.2R119 D122 P123R119-R125 PolarHBondContact O-NH1 3.38Å; D122-R125 HydrophobicContact CB-CB 4.24Å; D122-R125 HydrophobicContact CB-CG 4.06Å; D122-R125 PolarHBondContact O-N 3.47Å; P123-R125 PolarHBondContact O-N 3.22Å
126R62.1Low69.2Low173 Ų17394.1 Ų94.165%0.65349%0.486SS*.Hα-helixtrans-86.1-13176.4-142.5-178-163166.33.7113.2D122 P123D122-R126 PolarHBondContact O-N 2.68Å; D122-R126 VanDerWaalsContact O-N 3.13Å; P123-R126 PolarHBondContact O-N 3.2Å; P123-R126 VanDerWaalsContact O-N 3.09Å
127G57.5Low70Confident53 Ų5389 Ų8955%0.54647%0.47SS..THydrogen-bonded Turntrans86.310.8-179.900000114P123 L129P123-G127 PolarHBondContact O-N 2.93Å; G127-L129 PolarHBondContact O-N 3.45Å
128E67.8Low71.1Confident128 Ų12888.9 Ų88.960%0.59846%0.463SS*.  trans-81.976.1172.3-67.9174.1-153.800108.3P123P123-E128 PolarHBondContact O-N 2.66Å
129L73.4Confident72.4Confident93 Ų9385 Ų8549%0.48745%0.449SS..  trans-87.4137.9177.6-72151.2000109.7G127G127-L129 PolarHBondContact O-N 3.45Å
130S78.3Confident74Confident63 Ų6379.2 Ų79.244%0.44143%0.432SS..  trans-64.9149.4170.158.60000110.7C132S130-C132 VanDerWaalsContact C-N 3.26Å; S130-C132 VanDerWaalsContact CB-O 3.28Å; S130-C132 WeakPolarHBondContact CB-O 3.41Å; S130-C132 PolarHBondContact O-N 3.46Å; S130-C132 PolarHBondContact OG-O 2.89Å
131V85.3Confident75.4Confident95 Ų9573 Ų7358%0.57641%0.405SS*.SBendtrans-63.9-36176.3172.50000110.9C187 R188V131-C187 HydrophobicContact CG1-CB 3.36Å; V131-R188 PolarHBondContact O-N 3.39Å
132C83.8Confident76.9Confident59 Ų5974.1 Ų74.140%0.39942%0.416SS..SBendtrans-122.9136171.6-65.60000109.7S130 C187S130-C132 VanDerWaalsContact C-N 3.26Å; S130-C132 VanDerWaalsContact CB-O 3.28Å; S130-C132 WeakPolarHBondContact CB-O 3.41Å; S130-C132 PolarHBondContact O-N 3.46Å; S130-C132 PolarHBondContact OG-O 2.89Å; C132-C187 PolarHBondContact SG-SG 2.98Å
133D84.6Confident78.5Confident42 Ų4276.6 Ų76.623%0.22543%0.43CS..  trans-72.6138.8169-63.1-28.5000109.2N178D133-N178 HydrophobicContact CB-CB 3.69Å; D133-N178 WeakPolarHBondContact O-CB 3.48Å; D133-N178 PolarHBondContact O-N 3.01Å
134S84.9Confident80Confident66 Ų6676.9 Ų76.946%0.46242%0.424SS..EExtended strand (participates in β ladder)trans-129.4153.3177.158.10000111.1K176S134-K176 CarbonylContact C-O 3.54Å; S134-K176 VanDerWaalsContact CA-O 3.23Å; S134-K176 WeakPolarHBondContact CA-O 3.36Å; S134-K176 WeakPolarHBondContact CB-O 3.5Å
135I85.1Confident81.7Confident85 Ų8580.5 Ų80.544%0.43643%0.426SS..EExtended strand (participates in β ladder)trans-120.6131174.5-57.9169.5000106.7T175 K176 N178I135-T175 WeakPolarHBondContact O-CA 3.22Å; I135-K176 PolarHBondContact N-O 2.89Å; I135-K176 PolarHBondContact O-N 3.32Å; I135-N178 HydrophobicContact CD1-CB 4.09Å; I135-N178 HydrophobicContact CG1-CB 4.02Å
136S86.6Confident83.5Confident40 Ų4076.1 Ų76.128%0.2842%0.419SS..EExtended strand (participates in β ladder)trans-121.1139.4-179.9-49.60000111.2Y173 E174 T175S136-Y173 WeakPolarHBondContact CB-OH 2.87Å; S136-Y173 PolarHBondContact OG-OH 2.98Å; S136-E174 CarbonylContact C-O 3.59Å; S136-E174 VanDerWaalsContact CA-O 3.22Å; S136-E174 WeakPolarHBondContact CA-O 3.38Å; S136-T175 WeakPolarHBondContact CB-OG1 3.32Å; S136-T175 WeakPolarHBondContact OG-CB 3.4Å; S136-T175 VanDerWaalsContact OG-CG2 3.29Å; S136-T175 WeakPolarHBondContact OG-CG2 3.4Å; S136-T175 PolarHBondContact OG-OG1 2.9Å
137E87.2Confident85.1Confident88 Ų8869.4 Ų69.441%0.41140%0.4SS..EExtended strand (participates in β ladder)trans-147.3151.5-173.162.5-175.5167.200111.7V139 E174 K176E137-V139 HydrophobicContact CG-CG2 3.81Å; E137-E174 PolarHBondContact N-O 3.46Å; E137-E174 PolarHBondContact O-N 3.31Å; E137-K176 IonicContact OE1-NZ 3.69Å; E137-K176 PolarHBondContact OE1-NZ 3.04Å
138W88.4Confident86.9Confident63 Ų6371.7 Ų71.724%0.23940%0.404CS..EExtended strand (participates in β ladder)trans-85.4118.5168.5-72.9109.1000109.5M86 P92 E94 P96 F172 Y173M86-W138 HydrophobicContact CE-CH2 4.28Å; P92-W138 HydrophobicContact CB-CD2 4.12Å; P92-W138 HydrophobicContact CB-CH2 3.81Å; P92-W138 HydrophobicContact CB-CZ2 3.2Å; P92-W138 HydrophobicContact CB-CZ3 4.46Å; P92-W138 HydrophobicContact CG-CD2 3.68Å; P92-W138 VanDerWaalsContact CG-CE2 3.49Å; P92-W138 HydrophobicContact CG-CE3 3.85Å; P92-W138 HydrophobicContact CG-CG 4.34Å; P92-W138 HydrophobicContact CG-CH2 3.66Å; P92-W138 HydrophobicContact CG-CZ2 3.48Å; P92-W138 VanDerWaalsContact CG-CZ2 3.48Å; P92-W138 HydrophobicContact CG-CZ3 3.84Å; E94-W138 PolarHBondContact O-NE1 3.26Å; P96-W138 VanDerWaalsContact CD-CZ2 3.45Å; P96-W138 HydrophobicContact CG-CH2 4.2Å; P96-W138 HydrophobicContact CG-CZ2 4.09Å; W138-F172 CarbonylContact C-O 3.59Å; W138-F172 WeakPolarHBondContact CA-O 3.35Å; W138-Y173 HydrophobicContact CD2-CD2 4.12Å; W138-Y173 HydrophobicContact CE3-CD2 4.46Å; W138-Y173 HydrophobicContact CZ2-CD2 4.37Å
139V91Very high88.2Confident10 Ų1068.7 Ų68.76%0.06139%0.392CS..EExtended strand (participates in β ladder)trans-107.9137.3-178.8-175.40000109.3E137 D143 K144 F172 E174E137-V139 HydrophobicContact CG-CG2 3.81Å; V139-D143 HydrophobicContact CG1-CB 4.09Å; V139-K144 HydrophobicContact CG1-CB 3.7Å; V139-K144 HydrophobicContact CG1-CD 4.42Å; V139-F172 HydrophobicContact CB-CB 4.34Å; V139-F172 PolarHBondContact N-O 3.41Å; V139-F172 PolarHBondContact O-N 3.09Å; V139-E174 HydrophobicContact CB-CG 4.41Å; V139-E174 HydrophobicContact CG2-CB 4.02Å; V139-E174 HydrophobicContact CG2-CG 3.88Å
140T91.3Very high89.1Confident40 Ų4072.8 Ų72.825%0.24541%0.41CS..EExtended strand (participates in β ladder)trans-109.4167176.568.90000111.4A142 D143 K144 Y171T140-A142 PolarHBondContact O-N 3.3Å; T140-A142 VanDerWaalsContact O-N 3.15Å; T140-A142 WeakPolarHBondContact OG1-CB 3.5Å; T140-A142 PolarHBondContact OG1-N 3Å; T140-D143 PolarHBondContact O-N 3.03Å; T140-D143 PolarHBondContact OG1-OD2 2.71Å; T140-K144 PolarHBondContact O-N 3.44Å; T140-Y171 HydrophobicContact CG2-CD1 3.69Å; T140-Y171 HydrophobicContact CG2-CE1 3.66Å
141A89.4Confident89.9Confident8 Ų874.5 Ų74.57%0.06642%0.423CS..THydrogen-bonded Turntrans-63.2-16.2173.800000113.6D143 K144 K145 V157 E159A141-D143 VanDerWaalsContact C-N 3.31Å; A141-K144 WeakPolarHBondContact CA-O 3.44Å; A141-K145 WeakPolarHBondContact O-CG 3.28Å; A141-V157 HydrophobicContact CB-CG1 3.99Å; A141-E159 VanDerWaalsContact CB-CA 3.43Å; A141-E159 HydrophobicContact CB-CB 3.87Å; A141-E159 HydrophobicContact CB-CG 4.32Å
142A87.8Confident90.4Very high68 Ų6872.6 Ų72.656%0.56242%0.422SS*.THydrogen-bonded Turntrans-64.3-40.7172.300000111T140T140-A142 PolarHBondContact O-N 3.3Å; T140-A142 VanDerWaalsContact O-N 3.15Å; T140-A142 WeakPolarHBondContact OG1-CB 3.5Å; T140-A142 PolarHBondContact OG1-N 3Å
143D89.3Confident91.1Very high122 Ų12271.1 Ų71.165%0.65242%0.416SS*.THydrogen-bonded Turntrans-88-33.9-177.5-48.7-57.8000111.7V139 T140 A141V139-D143 HydrophobicContact CG1-CB 4.09Å; T140-D143 PolarHBondContact O-N 3.03Å; T140-D143 PolarHBondContact OG1-OD2 2.71Å; A141-D143 VanDerWaalsContact C-N 3.31Å
144K90.5Very high91.7Very high75 Ų7574.5 Ų74.533%0.32644%0.439SS..  trans-130.697.9-176.5-170.9172.9179.5177.10112.1V139 T140 A141 T146 V157 E174V139-K144 HydrophobicContact CG1-CB 3.7Å; V139-K144 HydrophobicContact CG1-CD 4.42Å; T140-K144 PolarHBondContact O-N 3.44Å; A141-K144 WeakPolarHBondContact CA-O 3.44Å; K144-T146 WeakPolarHBondContact CG-O 3.1Å; K144-V157 WeakPolarHBondContact O-CB 3.47Å; K144-E174 WeakPolarHBondContact CD-OE1 3.15Å; K144-E174 WeakPolarHBondContact CE-OE1 3.33Å; K144-E174 IonicContact NZ-OE1 2.68Å; K144-E174 PolarHBondContact NZ-OE1 3.24Å; K144-E174 IonicContact NZ-OE2 3.81Å
145K94.5Very high92.2Very high148 Ų14874.2 Ų74.264%0.64343%0.434SS*.  trans-88-15.1-176.7-64.9-179.6-178.8179.50114.8A141 T156 V157A141-K145 WeakPolarHBondContact O-CG 3.28Å; K145-T156 WeakPolarHBondContact O-CA 3.11Å; K145-V157 PolarHBondContact O-N 3.23Å
146T95.4Very high92.7Very high80 Ų8075.5 Ų75.549%0.49145%0.446SS..EExtended strand (participates in β ladder)trans-133.8150.1-176.459.40000111.3K144 T154 V155K144-T146 WeakPolarHBondContact CG-O 3.1Å; T146-T154 HydrophobicContact CG2-CG2 4.47Å; T146-V155 CarbonylContact C-O 3.56Å; T146-V155 VanDerWaalsContact CA-O 3.27Å; T146-V155 WeakPolarHBondContact CA-O 3.26Å
147A94.5Very high93Very high32 Ų3274.8 Ų74.826%0.26444%0.44SS..EExtended strand (participates in β ladder)trans-141.2168.3173.500000109.5T154 V155 V157A147-T154 CarbonylContact O-C 3.54Å; A147-T154 WeakPolarHBondContact O-CA 2.89Å; A147-V155 HydrophobicContact CB-CG2 4.14Å; A147-V155 PolarHBondContact N-O 3.41Å; A147-V155 WeakPolarHBondContact O-CG2 2.93Å; A147-V155 PolarHBondContact O-N 3.43Å; A147-V157 HydrophobicContact CB-CG2 3.85Å
148V95.9Very high93.3Very high101 Ų10175.1 Ų75.161%0.61244%0.444SS*.EExtended strand (participates in β ladder)trans-107.3126.9171.5-178.40000107.2G153V148-G153 CarbonylContact C-O 3.6Å; V148-G153 WeakPolarHBondContact CA-O 3.42Å
149D94Very high93.4Very high65 Ų6578.1 Ų78.135%0.34846%0.461SS..  trans-77.2178.7178.780.1-8.4000111.7S151 G152 G153 V155D149-S151 PolarHBondContact O-N 2.77Å; D149-S151 VanDerWaalsContact OD1-CA 3.31Å; D149-S151 WeakPolarHBondContact OD1-CA 3.39Å; D149-S151 WeakPolarHBondContact OD1-CB 2.94Å; D149-S151 PolarHBondContact OD1-N 3.26Å; D149-S151 PolarHBondContact OD1-OG 3.18Å; D149-S151 PolarHBondContact OD2-OG 3.08Å; D149-G152 PolarHBondContact O-N 3.09Å; D149-G152 VanDerWaalsContact O-N 3.1Å; D149-G152 PolarHBondContact OD1-N 3.28Å; D149-G153 PolarHBondContact N-O 2.88Å; D149-G153 PolarHBondContact OD1-N 3.2Å; D149-V155 HydrophobicContact CB-CG1 4.03Å; D149-V155 HydrophobicContact CB-CG2 4.36Å
150M92.6Very high93.4Very high178 Ų17881.9 Ų81.988%0.87748%0.476SS*.THydrogen-bonded Turntrans-67.2-16.9178.3-61.7-172.4-62.700113.6L50 G152L50-M150 HydrophobicContact CD2-CE 4.33Å; M150-G152 VanDerWaalsContact C-N 3.34Å
151S96.3Very high93.3Very high100 Ų10080.6 Ų80.670%0.69947%0.469SS*.THydrogen-bonded Turntrans-86.8-6.5175.679.50000112.9D149D149-S151 PolarHBondContact O-N 2.77Å; D149-S151 VanDerWaalsContact OD1-CA 3.31Å; D149-S151 WeakPolarHBondContact OD1-CA 3.39Å; D149-S151 WeakPolarHBondContact OD1-CB 2.94Å; D149-S151 PolarHBondContact OD1-N 3.26Å; D149-S151 PolarHBondContact OD1-OG 3.18Å; D149-S151 PolarHBondContact OD2-OG 3.08Å
152G95.6Very high93.3Very high54 Ų5483.4 Ų83.456%0.55749%0.486SS*.SBendtrans86.94.5-176.200000113.9D149 M150D149-G152 PolarHBondContact O-N 3.09Å; D149-G152 VanDerWaalsContact O-N 3.1Å; D149-G152 PolarHBondContact OD1-N 3.28Å; M150-G152 VanDerWaalsContact C-N 3.34Å
153G97.4Very high93.3Very high28 Ų2881.1 Ų81.129%0.28947%0.465SS..  trans-77.5142176.700000112.1V148 D149V148-G153 CarbonylContact C-O 3.6Å; V148-G153 WeakPolarHBondContact CA-O 3.42Å; D149-G153 PolarHBondContact N-O 2.88Å; D149-G153 PolarHBondContact OD1-N 3.2Å
154T97Very high93.1Very high113 Ų11379.2 Ų79.269%0.69346%0.461SS*.EExtended strand (participates in β ladder)trans-77.8123.4171.7-59.10000109.5T146 A147T146-T154 HydrophobicContact CG2-CG2 4.47Å; A147-T154 CarbonylContact O-C 3.54Å; A147-T154 WeakPolarHBondContact O-CA 2.89Å
155V95.7Very high92.9Very high60 Ų6081.6 Ų81.636%0.36447%0.472SS..EExtended strand (participates in β ladder)trans-121.5152.9-179-62.10000110.9T146 A147 D149T146-V155 CarbonylContact C-O 3.56Å; T146-V155 VanDerWaalsContact CA-O 3.27Å; T146-V155 WeakPolarHBondContact CA-O 3.26Å; A147-V155 HydrophobicContact CB-CG2 4.14Å; A147-V155 PolarHBondContact N-O 3.41Å; A147-V155 WeakPolarHBondContact O-CG2 2.93Å; A147-V155 PolarHBondContact O-N 3.43Å; D149-V155 HydrophobicContact CB-CG1 4.03Å; D149-V155 HydrophobicContact CB-CG2 4.36Å
156T95.4Very high92.5Very high113 Ų11376.3 Ų76.369%0.69346%0.459SS*.EExtended strand (participates in β ladder)trans-86.3134.5175.950.90000110.8K145K145-T156 WeakPolarHBondContact O-CA 3.11Å
157V94.5Very high92.3Very high24 Ų2478.7 Ų78.715%0.14546%0.464CS..PPolyproline II helixtrans-85.8129.8176176.90000109.2A141 K144 K145 A147 F172A141-V157 HydrophobicContact CB-CG1 3.99Å; K144-V157 WeakPolarHBondContact O-CB 3.47Å; K145-V157 PolarHBondContact O-N 3.23Å; A147-V157 HydrophobicContact CB-CG2 3.85Å; V157-F172 HydrophobicContact CG1-CD2 4.44Å; V157-F172 HydrophobicContact CG1-CE2 3.32Å; V157-F172 HydrophobicContact CG1-CZ 3.59Å
158L92.1Very high92Very high95 Ų9580 Ų8050%0.49747%0.467SS..PPolyproline II helixtrans-86.8139.2178.4-60.7178.6000110.3K160 Q170L158-K160 VanDerWaalsContact C-N 3.33Å; L158-Q170 PolarHBondContact O-OE1 3.13Å
159E90.9Very high91.8Very high126 Ų12681.1 Ų81.159%0.58946%0.464SS*.SBendtrans-70.2-35.8173.6-169.2-171.1153.900111.7A141 Q170A141-E159 VanDerWaalsContact CB-CA 3.43Å; A141-E159 HydrophobicContact CB-CB 3.87Å; A141-E159 HydrophobicContact CB-CG 4.32Å; E159-Q170 PolarHBondContact O-N 3.35Å
160K90.9Very high91.6Very high89 Ų8980.6 Ų80.639%0.38746%0.459SS..EExtended strand (participates in β ladder)trans-133135.1179.4-61.2178.8-172.91730110.3L158 Q167 L168 K169L158-K160 VanDerWaalsContact C-N 3.33Å; K160-Q167 HydrophobicContact CB-CB 4.26Å; K160-Q167 HydrophobicContact CD-CB 4.29Å; K160-L168 CarbonylContact C-O 3.58Å; K160-L168 WeakPolarHBondContact CA-O 3.37Å; K160-K169 HydrophobicContact CG-CG 4.47Å
161V89.8Confident91.5Very high14 Ų1475.4 Ų75.49%0.08543%0.43CS..EExtended strand (participates in β ladder)trans-90.9122.5174.2-178.80000107.8F54 I58 V163 Q167 L168 Q170F54-V161 HydrophobicContact CE1-CG1 3.81Å; F54-V161 HydrophobicContact CZ-CG1 4.29Å; I58-V161 HydrophobicContact CD1-CG1 4.07Å; V161-V163 HydrophobicContact CG1-CG1 4.49Å; V161-Q167 CarbonylContact O-C 3.6Å; V161-Q167 WeakPolarHBondContact O-CA 3.33Å; V161-L168 PolarHBondContact N-O 2.92Å; V161-L168 PolarHBondContact O-N 2.99Å; V161-Q170 HydrophobicContact CG2-CB 4.22Å; V161-Q170 HydrophobicContact CG2-CG 4.49Å
162P89.5Confident91.2Very high67 Ų6773.5 Ų73.544%0.43541%0.409SS..EExtended strand (participates in β ladder)trans-66.4139172.630.1-33.3000109.5
163V87.9Confident90.9Very high20 Ų2073.6 Ų73.612%0.12139%0.393CS..EExtended strand (participates in β ladder)trans-138160.4175-61.70000109.2I58 L62 V161 K165 G166 L168I58-V163 HydrophobicContact CG2-CB 4.33Å; I58-V163 HydrophobicContact CG2-CG1 3.52Å; L62-V163 HydrophobicContact CD1-CB 3.71Å; L62-V163 HydrophobicContact CD1-CG1 3.98Å; L62-V163 HydrophobicContact CD1-CG2 3.93Å; V161-V163 HydrophobicContact CG1-CG1 4.49Å; V163-K165 PolarHBondContact O-N 3.18Å; V163-K165 VanDerWaalsContact O-N 3.11Å; V163-G166 PolarHBondContact N-O 2.82Å; V163-G166 CarbonylContact O-C 3.43Å; V163-G166 PolarHBondContact O-N 3.33Å; V163-L168 HydrophobicContact CG1-CD1 3.81Å; V163-L168 HydrophobicContact CG1-CG 3.94Å; V163-L168 HydrophobicContact CG2-CG 4Å
164S85.4Confident90.5Very high81 Ų8173.9 Ų73.957%0.56639%0.387SS*.THydrogen-bonded Turntrans-52-37.9179.858.60000112.8
165K84.5Confident90.1Very high126 Ų12671.4 Ų71.455%0.54837%0.372SS..THydrogen-bonded Turntrans-89.810179.4-60.9-177.1-177.3178.50114.6L62 D63 V163L62-K165 PolarHBondContact O-NZ 3.13Å; D63-K165 IonicContact OD1-NZ 2.66Å; V163-K165 PolarHBondContact O-N 3.18Å; V163-K165 VanDerWaalsContact O-N 3.11Å
166G87.9Confident89.7Confident37 Ų3773.2 Ų73.238%0.38138%0.375SS..EExtended strand (participates in β ladder)trans134.4-124.4176.900000114.3V163V163-G166 PolarHBondContact N-O 2.82Å; V163-G166 CarbonylContact O-C 3.43Å; V163-G166 PolarHBondContact O-N 3.33Å
167Q90.1Very high89.3Confident129 Ų12972.7 Ų72.760%0.60338%0.375SS*.EExtended strand (participates in β ladder)trans-138.9133.3-178.8-68.9-173.9-31.800110.5K160 V161K160-Q167 HydrophobicContact CB-CB 4.26Å; K160-Q167 HydrophobicContact CD-CB 4.29Å; V161-Q167 CarbonylContact O-C 3.6Å; V161-Q167 WeakPolarHBondContact O-CA 3.33Å
168L89.1Confident89Confident59 Ų5973.8 Ų73.831%0.30938%0.38SS..EExtended strand (participates in β ladder)trans-102.2139.6174.5-62.9-179.5000110.3L87 K160 V161 V163L87-L168 HydrophobicContact CD2-CD1 4.06Å; K160-L168 CarbonylContact C-O 3.58Å; K160-L168 WeakPolarHBondContact CA-O 3.37Å; V161-L168 PolarHBondContact N-O 2.92Å; V161-L168 PolarHBondContact O-N 2.99Å; V163-L168 HydrophobicContact CG1-CD1 3.81Å; V163-L168 HydrophobicContact CG1-CG 3.94Å; V163-L168 HydrophobicContact CG2-CG 4Å
169K90.4Very high88.5Confident126 Ų12674.7 Ų74.755%0.54839%0.391SS..EExtended strand (participates in β ladder)trans-76133.8172.1-70-175.7-178179.20109.6K160 Y171K160-K169 HydrophobicContact CG-CG 4.47Å; K169-Y171 HydrophobicContact CB-CD2 4.33Å; K169-Y171 HydrophobicContact CB-CE2 3.54Å; K169-Y171 HydrophobicContact CD-CE2 4.39Å; K169-Y171 WeakPolarHBondContact CD-OH 3.15Å
170Q90.1Very high87.9Confident54 Ų5476.5 Ų76.525%0.25240%0.402SS..PPolyproline II helixtrans-94.5131.6177.6-166.5172.131.500110.8L158 E159 V161 F172L158-Q170 PolarHBondContact O-OE1 3.13Å; E159-Q170 PolarHBondContact O-N 3.35Å; V161-Q170 HydrophobicContact CG2-CB 4.22Å; V161-Q170 HydrophobicContact CG2-CG 4.49Å; Q170-F172 VanDerWaalsContact CD-CZ 3.41Å; Q170-F172 HydrophobicContact CG-CE2 3.85Å; Q170-F172 HydrophobicContact CG-CZ 3.86Å
171Y89.9Confident86.9Confident68 Ų6874 Ų7427%0.26740%0.401SS..EExtended strand (participates in β ladder)trans-128.1144.4174.6-62-86.2000109.3V91 T140 K169V91-Y171 HydrophobicContact CG1-CE1 4.45Å; T140-Y171 HydrophobicContact CG2-CD1 3.69Å; T140-Y171 HydrophobicContact CG2-CE1 3.66Å; K169-Y171 HydrophobicContact CB-CD2 4.33Å; K169-Y171 HydrophobicContact CB-CE2 3.54Å; K169-Y171 HydrophobicContact CD-CE2 4.39Å; K169-Y171 WeakPolarHBondContact CD-OH 3.15Å
172F90.6Very high85.8Confident60 Ų6080.9 Ų80.926%0.26343%0.427SS..EExtended strand (participates in β ladder)trans-114.1127.1174.1-60.9-89.1000108.8W138 V139 V157 Q170 E174W138-F172 CarbonylContact C-O 3.59Å; W138-F172 WeakPolarHBondContact CA-O 3.35Å; V139-F172 HydrophobicContact CB-CB 4.34Å; V139-F172 PolarHBondContact N-O 3.41Å; V139-F172 PolarHBondContact O-N 3.09Å; V157-F172 HydrophobicContact CG1-CD2 4.44Å; V157-F172 HydrophobicContact CG1-CE2 3.32Å; V157-F172 HydrophobicContact CG1-CZ 3.59Å; Q170-F172 VanDerWaalsContact CD-CZ 3.41Å; Q170-F172 HydrophobicContact CG-CE2 3.85Å; Q170-F172 HydrophobicContact CG-CZ 3.86Å; F172-E174 HydrophobicContact CB-CG 4.24Å; F172-E174 PolarHBondContact O-N 2.66Å
173Y88.9Confident84.7Confident56 Ų5680.2 Ų80.222%0.2242%0.422CS..EExtended strand (participates in β ladder)trans-90105.2169.4-176.9-117.1000109P95 P96 L98 S136 W138P95-Y173 HydrophobicContact CB-CD2 4.29Å; P95-Y173 HydrophobicContact CB-CE1 4.36Å; P95-Y173 HydrophobicContact CB-CE2 3.23Å; P95-Y173 WeakPolarHBondContact CB-OH 3.28Å; P96-Y173 VanDerWaalsContact CD-CD1 3.47Å; P96-Y173 VanDerWaalsContact CD-CD2 3.46Å; P96-Y173 HydrophobicContact CG-CD1 3.52Å; P96-Y173 HydrophobicContact CG-CD2 4.33Å; P96-Y173 HydrophobicContact CG-CE1 3.91Å; P96-Y173 HydrophobicContact CG-CG 3.73Å; L98-Y173 HydrophobicContact CD2-CE1 3.76Å; L98-Y173 HydrophobicContact CG-CE1 4.45Å; S136-Y173 WeakPolarHBondContact CB-OH 2.87Å; S136-Y173 PolarHBondContact OG-OH 2.98Å; W138-Y173 HydrophobicContact CD2-CD2 4.12Å; W138-Y173 HydrophobicContact CE3-CD2 4.46Å; W138-Y173 HydrophobicContact CZ2-CD2 4.37Å
174E89.4Confident83.7Confident35 Ų3589.4 Ų89.416%0.16446%0.46CS..EExtended strand (participates in β ladder)trans-105.6133.9-177.9-65-165.4-176.500110.5S136 E137 V139 K144 F172 K176S136-E174 CarbonylContact C-O 3.59Å; S136-E174 VanDerWaalsContact CA-O 3.22Å; S136-E174 WeakPolarHBondContact CA-O 3.38Å; E137-E174 PolarHBondContact N-O 3.46Å; E137-E174 PolarHBondContact O-N 3.31Å; V139-E174 HydrophobicContact CB-CG 4.41Å; V139-E174 HydrophobicContact CG2-CB 4.02Å; V139-E174 HydrophobicContact CG2-CG 3.88Å; K144-E174 WeakPolarHBondContact CD-OE1 3.15Å; K144-E174 WeakPolarHBondContact CE-OE1 3.33Å; K144-E174 IonicContact NZ-OE1 2.68Å; K144-E174 PolarHBondContact NZ-OE1 3.24Å; K144-E174 IonicContact NZ-OE2 3.81Å; F172-E174 HydrophobicContact CB-CG 4.24Å; F172-E174 PolarHBondContact O-N 2.66Å; E174-K176 WeakPolarHBondContact OE2-CE 3.21Å; E174-K176 IonicContact OE2-NZ 2.72Å; E174-K176 PolarHBondContact OE2-NZ 3.31Å
175T87.9Confident83.3Confident61 Ų6194.6 Ų94.637%0.37448%0.475SS..EExtended strand (participates in β ladder)trans-116.3126.6171.5-61.20000109I135 S136I135-T175 WeakPolarHBondContact O-CA 3.22Å; S136-T175 WeakPolarHBondContact CB-OG1 3.32Å; S136-T175 WeakPolarHBondContact OG-CB 3.4Å; S136-T175 VanDerWaalsContact OG-CG2 3.29Å; S136-T175 WeakPolarHBondContact OG-CG2 3.4Å; S136-T175 PolarHBondContact OG-OG1 2.9Å
176K88.4Confident82.8Confident97 Ų9790.8 Ų90.842%0.42247%0.472SS..EExtended strand (participates in β ladder)trans-122.6153.2-178.1-65168-173.4156.90109.5S134 I135 E137 E174 N178S134-K176 CarbonylContact C-O 3.54Å; S134-K176 VanDerWaalsContact CA-O 3.23Å; S134-K176 WeakPolarHBondContact CA-O 3.36Å; S134-K176 WeakPolarHBondContact CB-O 3.5Å; I135-K176 PolarHBondContact N-O 2.89Å; I135-K176 PolarHBondContact O-N 3.32Å; E137-K176 IonicContact OE1-NZ 3.69Å; E137-K176 PolarHBondContact OE1-NZ 3.04Å; E174-K176 WeakPolarHBondContact OE2-CE 3.21Å; E174-K176 IonicContact OE2-NZ 2.72Å; E174-K176 PolarHBondContact OE2-NZ 3.31Å; K176-N178 PolarHBondContact O-N 2.75Å
177C87.8Confident82.5Confident103 Ų10391.7 Ų91.770%0.69647%0.472SS*.EExtended strand (participates in β ladder)trans-63.3137.1171.2-61.50000109.9P179C177-P179 WeakPolarHBondContact O-CD 3.38Å
178N86.4Confident82Confident46 Ų4691.4 Ų91.425%0.24647%0.465CS..  trans-66.6117.7172.9-177.9-10.4000108.9D133 I135 K176 M180 G181D133-N178 HydrophobicContact CB-CB 3.69Å; D133-N178 WeakPolarHBondContact O-CB 3.48Å; D133-N178 PolarHBondContact O-N 3.01Å; I135-N178 HydrophobicContact CD1-CB 4.09Å; I135-N178 HydrophobicContact CG1-CB 4.02Å; K176-N178 PolarHBondContact O-N 2.75Å; N178-M180 PolarHBondContact O-N 2.85Å; N178-M180 WeakPolarHBondContact OD1-CB 3.44Å; N178-M180 PolarHBondContact OD1-N 3.29Å; N178-G181 PolarHBondContact O-N 3.23Å
179P81.9Confident81.6Confident114 Ų11493 Ų9374%0.7447%0.473SS*.THydrogen-bonded Turntrans-67.8-21.9-175.828.3-36.1000113.1C177 G181C177-P179 WeakPolarHBondContact O-CD 3.38Å; P179-G181 VanDerWaalsContact C-N 3.26Å; P179-G181 PolarHBondContact O-N 2.93Å
180M78.7Confident81.1Confident164 Ų16491.3 Ų91.381%0.80847%0.469SS*.THydrogen-bonded Turntrans-71.5-25.4179.2-68.4-64.7167.600112N178N178-M180 PolarHBondContact O-N 2.85Å; N178-M180 WeakPolarHBondContact OD1-CB 3.44Å; N178-M180 PolarHBondContact OD1-N 3.29Å
181G69.9Low80.6Confident37 Ų3793.3 Ų93.338%0.38148%0.481SS..  trans54.5170.3-177.400000113.5N178 P179N178-G181 PolarHBondContact O-N 3.23Å; P179-G181 VanDerWaalsContact C-N 3.26Å; P179-G181 PolarHBondContact O-N 2.93Å
182Y67.1Low80.1Confident159 Ų15994.8 Ų94.862%0.62449%0.494SS*.SBendtrans-98.3-28.6171.9-165.8-99.3000112.3R188Y182-R188 VanDerWaalsContact CD1-NH1 3.35Å
183T65.9Low79.4Confident53 Ų5397 Ų9733%0.32551%0.508SS..  trans-134.5153-17890.90000111.8E185 G186T183-E185 VanDerWaalsContact C-N 3.31Å; T183-E185 PolarHBondContact OG1-N 3.22Å; T183-G186 PolarHBondContact OG1-N 2.86Å; T183-G186 PolarHBondContact OG1-O 3.03Å
184K68.3Low78.8Confident213 Ų21399.7 Ų99.793%0.92653%0.527SS*.SBendtrans-82.4-13175.6-59.9-178.6-178.9177.30112.7
185E76.8Confident78.1Confident189 Ų189104.4 Ų104.488%0.88355%0.553SS**SBendtrans-103.1-1.9-170.7-54.8-68.1158.900112.7T183T183-E185 VanDerWaalsContact C-N 3.31Å; T183-E185 PolarHBondContact OG1-N 3.22Å
186G73.8Confident77.3Confident47 Ų47107.7 Ų107.749%0.48557%0.567SS.*SBendtrans138.6-149.2177.800000113.3T183T183-G186 PolarHBondContact OG1-N 2.86Å; T183-G186 PolarHBondContact OG1-O 3.03Å
187C81.5Confident76.4Confident56 Ų56108.6 Ų108.638%0.37858%0.579SS.*  trans-66.1161.8171.7-56.60000111.2V131 C132V131-C187 HydrophobicContact CG1-CB 3.36Å; C132-C187 PolarHBondContact SG-SG 2.98Å
188R78.4Confident75.3Confident122 Ų122109.1 Ų109.146%0.4657%0.569SS.*  trans-55.30176.4-177.7-174.6-63.6-81.6-4112.4V131 Y182V131-R188 PolarHBondContact O-N 3.39Å; Y182-R188 VanDerWaalsContact CD1-NH1 3.35Å

Retrieved 188 of 188 residues in 232.6 ms (Link to these results)