Q99PM4_RAT Loading...

DNA helicase

AlphaFold DB , UniProt , Accession Q99PM4, Species RAT (Rattus norvegicus, Rat), Gene n/a, Length 61 aa.

						>Q99PM4_RAT|Q99PM4
DQLITTSGMVIRTSQLNPEMQEAFFQCQVCAHTTRVEMDRGRIAEPCTCVHCHTTHSMALI
					

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(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	D	57.6	Low	83.4	Confident	218 Å²	218	150.2 Å²	150.2	100%	1.166	86%	0.858	S	S	*	*				0	125.5	0	-74.3	-95.2	0	0	0	111.7
2	Q	64.9	Low	84.1	Confident	181 Å²	181	155.7 Å²	155.7	85%	0.846	85%	0.854	S	S	*	*			trans	-128.5	141.7	167.9	-73.4	-168.7	-4.8	0	0	108.8
3	L	83.1	Confident	84.3	Confident	180 Å²	180	152.8 Å²	152.8	94%	0.942	84%	0.844	S	S	*	*			trans	-78.7	127.5	177.8	-77.1	151.3	0	0	0	109.5
4	I	85.8	Confident	84.7	Confident	147 Å²	147	149.8 Å²	149.8	75%	0.754	84%	0.84	S	S	*	*			trans	-125.3	131.1	177.3	-51.7	176.2	0	0	0	107.7	T6	I4-T6 HydrophobicContact CG2-CG2 4.47Å
5	T	88.9	Confident	84.9	Confident	134 Å²	134	151.4 Å²	151.4	82%	0.822	84%	0.838	S	S	*	*			trans	-114.1	126.9	176.8	-49.4	0	0	0	0	109.6
6	T	86.4	Confident	84.9	Confident	128 Å²	128	152.9 Å²	152.9	79%	0.785	84%	0.843	S	S	*	*			trans	-122.8	144.6	177.5	48.3	0	0	0	0	109.9	I4	I4-T6 HydrophobicContact CG2-CG2 4.47Å
7	S	90.3	Very high	84.7	Confident	126 Å²	126	152.1 Å²	152.1	88%	0.881	84%	0.837	S	S	*	*			trans	-123.4	136.9	178.9	-56	0	0	0	0	109.9
8	G	89.9	Confident	84.5	Confident	79 Å²	79	151 Å²	151	81%	0.814	84%	0.838	S	S	*	*			trans	-176.5	174.1	-177.7	0	0	0	0	0	112.4
9	M	92	Very high	84.3	Confident	175 Å²	175	151.5 Å²	151.5	86%	0.862	83%	0.834	S	S	*	*			trans	-95.5	133.6	176.7	-175.8	-179.3	-69.2	0	0	110.3
10	V	87.9	Confident	84	Confident	117 Å²	117	148.5 Å²	148.5	71%	0.709	81%	0.814	S	S	*	*			trans	-78.3	123.5	176.9	-177.8	0	0	0	0	109.6	T13	V10-T13 HydrophobicContact CG1-CG2 4.41Å
11	I	91.2	Very high	83.8	Confident	167 Å²	167	148.7 Å²	148.7	86%	0.856	81%	0.81	S	S	*	*			trans	-96.4	-35	-175	-54.6	173.6	0	0	0	111.9
12	R	90.9	Very high	85	Confident	216 Å²	216	142.6 Å²	142.6	82%	0.815	77%	0.774	S	S	*	*			trans	-155.8	139.4	-178.9	-159.8	174.3	81.6	-116.5	4.9	110.6
13	T	86.5	Confident	85.9	Confident	118 Å²	118	134.1 Å²	134.1	72%	0.724	74%	0.735	S	S	*	*	P	Polyproline II helix	trans	-98.8	145.2	167.8	50.9	0	0	0	0	109.9	V10	V10-T13 HydrophobicContact CG1-CG2 4.41Å
14	S	89.9	Confident	86.1	Confident	111 Å²	111	130.6 Å²	130.6	78%	0.776	71%	0.712	S	S	*	*	P	Polyproline II helix	trans	-81.2	159.3	168.4	54.9	0	0	0	0	110.2
15	Q	87.9	Confident	86.2	Confident	174 Å²	174	124.2 Å²	124.2	81%	0.813	68%	0.679	S	S	*	*	P	Polyproline II helix	trans	-70.8	162.5	167.9	-63.6	-179.1	17.7	0	0	110	N17	Q15-N17 PolarHBondContact O-N 2.98Å; Q15-N17 PolarHBondContact O-OD1 3.15Å
16	L	84.4	Confident	86.1	Confident	175 Å²	175	120.6 Å²	120.6	92%	0.916	65%	0.653	S	S	*	*			trans	-69.2	114.3	177.9	-66	167.1	0	0	0	109.1
17	N	82.6	Confident	86.2	Confident	140 Å²	140	114.5 Å²	114.5	75%	0.749	62%	0.615	S	S	*	*	P	Polyproline II helix	trans	-94.4	118.2	170.2	-75.6	29	0	0	0	108.2	Q15 E19	Q15-N17 PolarHBondContact O-N 2.98Å; Q15-N17 PolarHBondContact O-OD1 3.15Å; N17-E19 PolarHBondContact O-N 3.48Å
18	P	80.6	Confident	86	Confident	132 Å²	132	114.9 Å²	114.9	86%	0.857	60%	0.603	S	S	*	*	P	Polyproline II helix	trans	-66.2	128.2	175.6	26.2	-31.6	0	0	0	109.8
19	E	81.7	Confident	85.9	Confident	161 Å²	161	115.7 Å²	115.7	75%	0.752	59%	0.592	S	S	*	*	P	Polyproline II helix	trans	-100	130	173.4	-169.5	171	98.9	0	0	108.8	N17 Q21	N17-E19 PolarHBondContact O-N 3.48Å; E19-Q21 PolarHBondContact O-N 3.4Å
20	M	77.1	Confident	85.8	Confident	91 Å²	91	109.5 Å²	109.5	45%	0.448	57%	0.565	S	S	.	*	P	Polyproline II helix	trans	-72.9	116	178.2	-173.2	-178.6	-77.5	0	0	109	M38 I43	M20-M38 VanDerWaalsContact O-CE 3.23Å; M20-M38 WeakPolarHBondContact O-CE 3.35Å; M20-M38 VanDerWaalsContact O-SD 3.39Å; M20-I43 HydrophobicContact SD-CD1 3.41Å; M20-I43 WeakPolarHBondContact SD-CD1 3.31Å
21	Q	79.8	Confident	85.8	Confident	153 Å²	153	107 Å²	107	72%	0.715	56%	0.557	S	S	*	*			trans	-95.3	-38.5	177.4	-70.9	-174.3	-36.7	0	0	112.4	E19 M38	E19-Q21 PolarHBondContact O-N 3.4Å; Q21-M38 WeakPolarHBondContact O-CB 3.46Å; Q21-M38 PolarHBondContact O-N 2.78Å; Q21-M38 VanDerWaalsContact O-N 3.1Å
22	E	82.4	Confident	85.6	Confident	90 Å²	90	102.4 Å²	102.4	42%	0.421	53%	0.532	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-133.6	138.4	-177.7	-63.8	-179.7	178.2	0	0	109.2
23	A	85.2	Confident	85.4	Confident	2 Å²	2	96.3 Å²	96.3	2%	0.017	52%	0.519	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-102.8	131.7	174	0	0	0	0	0	109.6	F25 R35 V36 I43 L60	A23-F25 HydrophobicContact CB-CD2 4.28Å; A23-F25 HydrophobicContact CB-CE2 3.63Å; A23-F25 HydrophobicContact CB-CZ 4.26Å; A23-R35 WeakPolarHBondContact O-CA 3.41Å; A23-V36 PolarHBondContact N-O 3.45Å; A23-V36 PolarHBondContact O-N 3.43Å; A23-I43 HydrophobicContact CB-CD1 4.18Å; A23-I43 HydrophobicContact CB-CG1 4.32Å; A23-I43 HydrophobicContact CB-CG2 3.46Å; A23-I43 VanDerWaalsContact CB-CG2 3.46Å; A23-L60 HydrophobicContact CB-CD1 3.77Å
24	F	86.9	Confident	85.3	Confident	106 Å²	106	92.3 Å²	92.3	47%	0.465	49%	0.494	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-99.1	122.9	173.2	-73.7	-87.9	0	0	0	109.5	R35 L60 I61	F24-R35 HydrophobicContact CD1-CB 4.3Å; F24-R35 HydrophobicContact CE1-CB 4.07Å; F24-L60 WeakPolarHBondContact O-CA 3.11Å; F24-I61 PolarHBondContact O-N 2.9Å
25	F	87.6	Confident	85.1	Confident	14 Å²	14	96.1 Å²	96.1	6%	0.061	49%	0.491	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-111.5	134.8	174.4	-69.1	-84.9	0	0	0	110	A23 T33 T34 V36 I43 E45 M58 A59 L60	A23-F25 HydrophobicContact CB-CD2 4.28Å; A23-F25 HydrophobicContact CB-CE2 3.63Å; A23-F25 HydrophobicContact CB-CZ 4.26Å; F25-T33 CarbonylContact O-C 3.52Å; F25-T33 VanDerWaalsContact O-CA 3.31Å; F25-T33 WeakPolarHBondContact O-CA 3.23Å; F25-T34 PolarHBondContact N-O 2.88Å; F25-T34 PolarHBondContact O-N 2.88Å; F25-V36 HydrophobicContact CD2-CB 4.26Å; F25-V36 HydrophobicContact CD2-CG2 3.83Å; F25-V36 HydrophobicContact CE2-CB 4.1Å; F25-V36 HydrophobicContact CE2-CG2 4.03Å; F25-I43 HydrophobicContact CE2-CG2 3.63Å; F25-I43 HydrophobicContact CZ-CG2 3.63Å; F25-E45 HydrophobicContact CD1-CG 4.34Å; F25-E45 HydrophobicContact CE1-CB 4.31Å; F25-E45 HydrophobicContact CE1-CG 3.87Å; F25-E45 HydrophobicContact CZ-CB 4.3Å; F25-E45 HydrophobicContact CZ-CG 4.33Å; F25-M58 HydrophobicContact CB-CB 4.28Å; F25-M58 HydrophobicContact CB-CE 4.47Å; F25-M58 HydrophobicContact CD1-CB 4.36Å; F25-A59 CarbonylContact C-O 3.58Å; F25-A59 VanDerWaalsContact CA-O 3.32Å; F25-A59 WeakPolarHBondContact CA-O 3.37Å; F25-L60 HydrophobicContact CE1-CB 4.34Å; F25-L60 HydrophobicContact CE1-CD1 4.01Å; F25-L60 HydrophobicContact CE2-CD1 4.32Å; F25-L60 HydrophobicContact CZ-CD1 3.91Å
26	Q	87.1	Confident	84.9	Confident	58 Å²	58	89.1 Å²	89.1	27%	0.271	46%	0.46	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-120.7	133.1	172.7	-173.8	-179.7	-64.7	0	0	110.4	H32 T33 A59 I61	Q26-H32 WeakPolarHBondContact CA-O 3.48Å; Q26-T33 HydrophobicContact CB-CG2 4.12Å; Q26-T33 HydrophobicContact CG-CG2 3.93Å; Q26-A59 PolarHBondContact N-O 3.37Å; Q26-A59 PolarHBondContact O-N 3.2Å; Q26-I61 HydrophobicContact CB-CD1 3.37Å; Q26-I61 HydrophobicContact CB-CG1 4Å; Q26-I61 HydrophobicContact CG-CD1 4.06Å
27	C	88.2	Confident	84.8	Confident	0 Å²	0	88.2 Å²	88.2	0%	0	45%	0.452	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-71.4	128.4	172.5	-174.4	0	0	0	0	111.2	V29 C30 A31 H32 C49 S57	C27-V29 VanDerWaalsContact C-N 3.26Å; C27-V29 PolarHBondContact O-N 3.31Å; C27-V29 PolarHBondContact SG-N 3.1Å; C27-C30 VanDerWaalsContact SG-SG 3.62Å; C27-A31 WeakPolarHBondContact O-CA 3.49Å; C27-A31 PolarHBondContact O-N 3.37Å; C27-H32 HydrophobicContact CB-CB 4.39Å; C27-H32 PolarHBondContact N-O 3.43Å; C27-C49 HydrophobicContact CB-CB 4.49Å; C27-S57 CarbonylContact C-O 3.51Å; C27-S57 WeakPolarHBondContact CA-O 3.48Å
28	Q	86.5	Confident	84.7	Confident	134 Å²	134	84.1 Å²	84.1	63%	0.626	43%	0.429	S	S	*	.	T	Hydrogen-bonded Turn	trans	-71.6	-17.2	177.5	-67.5	-65.6	-39.3	0	0	113.7	S57 A59	Q28-S57 PolarHBondContact N-O 3.02Å; Q28-A59 HydrophobicContact CG-CB 4.18Å
29	V	87.6	Confident	84.5	Confident	96 Å²	96	83.4 Å²	83.4	58%	0.582	42%	0.418	S	S	*	.	T	Hydrogen-bonded Turn	trans	-92.6	-50.4	-176.5	-178	0	0	0	0	111.8	C27 T54	C27-V29 VanDerWaalsContact C-N 3.26Å; C27-V29 PolarHBondContact O-N 3.31Å; C27-V29 PolarHBondContact SG-N 3.1Å; V29-T54 HydrophobicContact CG2-CG2 4.29Å
30	C	89.4	Confident	84	Confident	44 Å²	44	87 Å²	87	30%	0.297	42%	0.424	S	S	.	.	T	Hydrogen-bonded Turn	trans	-112	2.7	-174.7	64.6	0	0	0	0	114.2	C27 H32 C52	C27-C30 VanDerWaalsContact SG-SG 3.62Å; C30-H32 PolarHBondContact O-N 3.24Å; C30-H32 VanDerWaalsContact O-N 3.08Å; C30-H32 VanDerWaalsContact SG-CB 3.57Å; C30-C52 HydrophobicContact CB-CB 4.09Å
31	A	87.6	Confident	83.8	Confident	64 Å²	64	85.2 Å²	85.2	53%	0.529	43%	0.43	S	S	.	.			trans	57.9	16.8	-176.6	0	0	0	0	0	115.1	C27 T33	C27-A31 WeakPolarHBondContact O-CA 3.49Å; C27-A31 PolarHBondContact O-N 3.37Å; A31-T33 PolarHBondContact O-N 2.83Å
32	H	86.9	Confident	83.7	Confident	71 Å²	71	87.9 Å²	87.9	33%	0.329	43%	0.433	S	S	.	.			trans	-67.8	128.3	175.5	-174	73.1	0	0	0	110.8	Q26 C27 C30 T34 H51	Q26-H32 WeakPolarHBondContact CA-O 3.48Å; C27-H32 HydrophobicContact CB-CB 4.39Å; C27-H32 PolarHBondContact N-O 3.43Å; C30-H32 PolarHBondContact O-N 3.24Å; C30-H32 VanDerWaalsContact O-N 3.08Å; C30-H32 VanDerWaalsContact SG-CB 3.57Å; H32-T34 PolarHBondContact CD2-OG1 3.24Å; H32-H51 HydrophobicContact CB-CB 4.28Å
33	T	86.6	Confident	83.7	Confident	89 Å²	89	86.9 Å²	86.9	55%	0.546	43%	0.43	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-99.1	137.6	178.2	49.8	0	0	0	0	111.1	F25 Q26 A31	F25-T33 CarbonylContact O-C 3.52Å; F25-T33 VanDerWaalsContact O-CA 3.31Å; F25-T33 WeakPolarHBondContact O-CA 3.23Å; Q26-T33 HydrophobicContact CB-CG2 4.12Å; Q26-T33 HydrophobicContact CG-CG2 3.93Å; A31-T33 PolarHBondContact O-N 2.83Å
34	T	85	Confident	83.4	Confident	34 Å²	34	90.2 Å²	90.2	21%	0.209	46%	0.457	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-135.4	130.2	178.4	-58.3	0	0	0	0	108.5	F25 H32 V36 M58	F25-T34 PolarHBondContact N-O 2.88Å; F25-T34 PolarHBondContact O-N 2.88Å; H32-T34 PolarHBondContact CD2-OG1 3.24Å; T34-V36 HydrophobicContact CG2-CG2 4.4Å; T34-M58 HydrophobicContact CG2-CE 4.31Å; T34-M58 WeakPolarHBondContact OG1-CE 3.16Å
35	R	85.4	Confident	82.9	Confident	190 Å²	190	89.8 Å²	89.8	72%	0.717	46%	0.457	S	S	*	.	E	Extended strand (participates in β ladder)	trans	-94.4	133	173.2	57.2	-175.8	171.7	178.8	-1.2	109.3	A23 F24	A23-R35 WeakPolarHBondContact O-CA 3.41Å; F24-R35 HydrophobicContact CD1-CB 4.3Å; F24-R35 HydrophobicContact CE1-CB 4.07Å
36	V	84.7	Confident	82.3	Confident	27 Å²	27	90.8 Å²	90.8	16%	0.164	47%	0.465	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-122.5	124.7	175.4	-178.4	0	0	0	0	108.2	A23 F25 T34 A44 P46	A23-V36 PolarHBondContact N-O 3.45Å; A23-V36 PolarHBondContact O-N 3.43Å; F25-V36 HydrophobicContact CD2-CB 4.26Å; F25-V36 HydrophobicContact CD2-CG2 3.83Å; F25-V36 HydrophobicContact CE2-CB 4.1Å; F25-V36 HydrophobicContact CE2-CG2 4.03Å; T34-V36 HydrophobicContact CG2-CG2 4.4Å; V36-A44 WeakPolarHBondContact CG1-O 3.5Å; V36-P46 HydrophobicContact CG2-CG 4.42Å
37	E	82.1	Confident	81.8	Confident	156 Å²	156	92 Å²	92	73%	0.729	48%	0.478	S	S	*	.	E	Extended strand (participates in β ladder)	trans	-71	141.5	174.9	-63.6	-178	157.9	0	0	110.2	D39	E37-D39 PolarHBondContact O-N 2.84Å
38	M	79.4	Confident	81.6	Confident	55 Å²	55	94.9 Å²	94.9	27%	0.271	50%	0.497	S	S	.	.			trans	-81.7	111.1	176.8	-164.5	-175.9	72.1	0	0	110.3	M20 Q21 R42 I43	M20-M38 VanDerWaalsContact O-CE 3.23Å; M20-M38 WeakPolarHBondContact O-CE 3.35Å; M20-M38 VanDerWaalsContact O-SD 3.39Å; Q21-M38 WeakPolarHBondContact O-CB 3.46Å; Q21-M38 PolarHBondContact O-N 2.78Å; Q21-M38 VanDerWaalsContact O-N 3.1Å; M38-R42 WeakPolarHBondContact CG-O 3.44Å; M38-I43 HydrophobicContact CB-CG1 4.48Å; M38-I43 HydrophobicContact CG-CG1 3.89Å; M38-I43 HydrophobicContact SD-CG1 4.31Å
39	D	76.9	Confident	81.5	Confident	116 Å²	116	88.6 Å²	88.6	62%	0.62	47%	0.467	S	S	*	.	B	Isolated β-bridge	trans	-92.1	114.9	174.1	-160.1	-82.9	0	0	0	109.7	E37 G41 R42	E37-D39 PolarHBondContact O-N 2.84Å; D39-G41 VanDerWaalsContact C-N 3.31Å; D39-G41 PolarHBondContact O-N 2.93Å; D39-G41 VanDerWaalsContact O-N 3.15Å; D39-R42 PolarHBondContact N-O 3.41Å; D39-R42 PolarHBondContact O-N 3.11Å
40	R	71.3	Confident	81.2	Confident	236 Å²	236	89.2 Å²	89.2	89%	0.891	47%	0.471	S	S	*	.	T	Hydrogen-bonded Turn	trans	51.3	40.9	173.4	-61.4	175.8	177.3	-156.9	-2.7	115	R42	R40-R42 VanDerWaalsContact C-N 3.31Å; R40-R42 PolarHBondContact O-N 3.15Å
41	G	74	Confident	81	Confident	55 Å²	55	93.7 Å²	93.7	57%	0.567	49%	0.487	S	S	*	.	T	Hydrogen-bonded Turn	trans	80	9.8	178	0	0	0	0	0	114.5	D39	D39-G41 VanDerWaalsContact C-N 3.31Å; D39-G41 PolarHBondContact O-N 2.93Å; D39-G41 VanDerWaalsContact O-N 3.15Å
42	R	77.2	Confident	80.9	Confident	209 Å²	209	92.6 Å²	92.6	79%	0.789	48%	0.475	S	S	*	.	B	Isolated β-bridge	trans	-116.6	134.7	171.3	-66	-172.3	-178.5	-136	0.5	110	M38 D39 R40	M38-R42 WeakPolarHBondContact CG-O 3.44Å; D39-R42 PolarHBondContact N-O 3.41Å; D39-R42 PolarHBondContact O-N 3.11Å; R40-R42 VanDerWaalsContact C-N 3.31Å; R40-R42 PolarHBondContact O-N 3.15Å
43	I	81.2	Confident	80.8	Confident	69 Å²	69	96.1 Å²	96.1	35%	0.354	49%	0.491	S	S	.	.			trans	-100	120.7	171.8	-56.2	162	0	0	0	106.4	M20 A23 F25 M38 E45	M20-I43 HydrophobicContact SD-CD1 3.41Å; M20-I43 WeakPolarHBondContact SD-CD1 3.31Å; A23-I43 HydrophobicContact CB-CD1 4.18Å; A23-I43 HydrophobicContact CB-CG1 4.32Å; A23-I43 HydrophobicContact CB-CG2 3.46Å; A23-I43 VanDerWaalsContact CB-CG2 3.46Å; F25-I43 HydrophobicContact CE2-CG2 3.63Å; F25-I43 HydrophobicContact CZ-CG2 3.63Å; M38-I43 HydrophobicContact CB-CG1 4.48Å; M38-I43 HydrophobicContact CG-CG1 3.89Å; M38-I43 HydrophobicContact SD-CG1 4.31Å; I43-E45 PolarHBondContact O-N 3.06Å
44	A	79	Confident	80.7	Confident	71 Å²	71	94.1 Å²	94.1	59%	0.587	48%	0.479	S	S	*	.			trans	-86.7	103.1	176.4	0	0	0	0	0	109.3	V36 P46	V36-A44 WeakPolarHBondContact CG1-O 3.5Å; A44-P46 WeakPolarHBondContact O-CD 3.32Å
45	E	76.3	Confident	80.7	Confident	97 Å²	97	96.7 Å²	96.7	45%	0.453	50%	0.495	S	S	.	.			trans	-67.2	127.1	174.4	-172.7	-173	160.6	0	0	110.3	F25 I43 C47	F25-E45 HydrophobicContact CD1-CG 4.34Å; F25-E45 HydrophobicContact CE1-CB 4.31Å; F25-E45 HydrophobicContact CE1-CG 3.87Å; F25-E45 HydrophobicContact CZ-CB 4.3Å; F25-E45 HydrophobicContact CZ-CG 4.33Å; I43-E45 PolarHBondContact O-N 3.06Å; E45-C47 PolarHBondContact O-N 3.5Å
46	P	76.4	Confident	80.4	Confident	35 Å²	35	94.6 Å²	94.6	23%	0.227	49%	0.493	C	S	.	.			trans	-66.7	114.8	171.5	22.4	-29.9	0	0	0	110.9	V36 A44 T48 M58	V36-P46 HydrophobicContact CG2-CG 4.42Å; A44-P46 WeakPolarHBondContact O-CD 3.32Å; P46-T48 PolarHBondContact O-N 3.1Å; P46-T48 VanDerWaalsContact O-N 3.11Å; P46-M58 HydrophobicContact CB-CE 3.81Å; P46-M58 HydrophobicContact CB-SD 3.81Å; P46-M58 HydrophobicContact CG-CE 3.2Å; P46-M58 HydrophobicContact CG-SD 3.46Å; P46-M58 WeakPolarHBondContact CG-SD 3.36Å
47	C	76.8	Confident	80.3	Confident	83 Å²	83	94.5 Å²	94.5	56%	0.561	49%	0.494	S	S	*	.	S	Bend	trans	-66.1	-15.2	-175.5	-54.1	0	0	0	0	114.3	E45 T55 H56	E45-C47 PolarHBondContact O-N 3.5Å; C47-T55 WeakPolarHBondContact O-CA 3.39Å; C47-H56 PolarHBondContact O-N 3.33Å; C47-H56 VanDerWaalsContact O-N 3.15Å
48	T	82.4	Confident	80.5	Confident	62 Å²	62	87.9 Å²	87.9	38%	0.38	46%	0.463	S	S	.	.	B	Isolated β-bridge	trans	-146.2	134.9	-174.3	-39.1	0	0	0	0	110.5	P46 H53 T55	P46-T48 PolarHBondContact O-N 3.1Å; P46-T48 VanDerWaalsContact O-N 3.11Å; T48-H53 WeakPolarHBondContact CG2-O 3.42Å; T48-T55 HydrophobicContact CG2-CG2 4.37Å
49	C	85.6	Confident	80.7	Confident	2 Å²	2	86.7 Å²	86.7	1%	0.014	46%	0.462	C	S	.	.			trans	-69.9	134	175.9	-175.7	0	0	0	0	111.3	C27 H51 C52 H53 T54 M58	C27-C49 HydrophobicContact CB-CB 4.49Å; C49-H51 PolarHBondContact O-N 2.86Å; C49-H51 PolarHBondContact SG-N 2.81Å; C49-C52 VanDerWaalsContact CB-SG 3.54Å; C49-C52 VanDerWaalsContact SG-SG 3.6Å; C49-H53 VanDerWaalsContact O-CA 3.26Å; C49-H53 WeakPolarHBondContact O-CA 3.26Å; C49-H53 PolarHBondContact O-N 3.31Å; C49-T54 PolarHBondContact N-O 3.48Å; C49-T54 VanDerWaalsContact N-O 3.1Å; C49-M58 HydrophobicContact CB-SD 4.48Å
50	V	81.6	Confident	81.1	Confident	108 Å²	108	85.7 Å²	85.7	66%	0.655	46%	0.456	S	S	*	.	T	Hydrogen-bonded Turn	trans	-65.6	-26.6	178.7	-164.2	0	0	0	0	112.5
51	H	84.1	Confident	81.6	Confident	138 Å²	138	81.4 Å²	81.4	64%	0.639	45%	0.449	S	S	*	.	T	Hydrogen-bonded Turn	trans	-95.6	-47.4	-173.3	-164.8	64.9	0	0	0	113.5	H32 C49	H32-H51 HydrophobicContact CB-CB 4.28Å; C49-H51 PolarHBondContact O-N 2.86Å; C49-H51 PolarHBondContact SG-N 2.81Å
52	C	86.8	Confident	82	Confident	42 Å²	42	82.8 Å²	82.8	28%	0.284	44%	0.444	S	S	.	.	T	Hydrogen-bonded Turn	trans	-106.6	1.7	-175.9	63.6	0	0	0	0	114.2	C30 C49 T54	C30-C52 HydrophobicContact CB-CB 4.09Å; C49-C52 VanDerWaalsContact CB-SG 3.54Å; C49-C52 VanDerWaalsContact SG-SG 3.6Å; C52-T54 PolarHBondContact O-N 3.08Å; C52-T54 PolarHBondContact O-OG1 2.99Å; C52-T54 PolarHBondContact SG-OG1 2.91Å
53	H	85	Confident	82.2	Confident	144 Å²	144	76.1 Å²	76.1	67%	0.667	43%	0.425	S	S	*	.			trans	52.8	15.7	-177.9	-67.4	-73.1	0	0	0	115.3	T48 C49	T48-H53 WeakPolarHBondContact CG2-O 3.42Å; C49-H53 VanDerWaalsContact O-CA 3.26Å; C49-H53 WeakPolarHBondContact O-CA 3.26Å; C49-H53 PolarHBondContact O-N 3.31Å
54	T	83	Confident	82.3	Confident	47 Å²	47	76.5 Å²	76.5	29%	0.288	43%	0.429	S	S	.	.			trans	-76.4	130.7	178.7	-38	0	0	0	0	109.3	V29 C49 C52 S57	V29-T54 HydrophobicContact CG2-CG2 4.29Å; C49-T54 PolarHBondContact N-O 3.48Å; C49-T54 VanDerWaalsContact N-O 3.1Å; C52-T54 PolarHBondContact O-N 3.08Å; C52-T54 PolarHBondContact O-OG1 2.99Å; C52-T54 PolarHBondContact SG-OG1 2.91Å; T54-S57 WeakPolarHBondContact CG2-OG 3.33Å
55	T	84.9	Confident	82.5	Confident	88 Å²	88	76.8 Å²	76.8	54%	0.54	42%	0.42	S	S	.	.	B	Isolated β-bridge	trans	-77.3	146.2	177.2	51.9	0	0	0	0	110.8	C47 T48 S57	C47-T55 WeakPolarHBondContact O-CA 3.39Å; T48-T55 HydrophobicContact CG2-CG2 4.37Å; T55-S57 PolarHBondContact O-N 3.14Å; T55-S57 VanDerWaalsContact O-N 3.1Å; T55-S57 PolarHBondContact O-OG 3.1Å
56	H	80.2	Confident	82.8	Confident	147 Å²	147	75.6 Å²	75.6	68%	0.681	42%	0.418	S	S	*	.	T	Hydrogen-bonded Turn	trans	50.2	37.7	172.5	-60.3	-74.4	0	0	0	115	C47	C47-H56 PolarHBondContact O-N 3.33Å; C47-H56 VanDerWaalsContact O-N 3.15Å
57	S	82.8	Confident	83.3	Confident	25 Å²	25	78.3 Å²	78.3	18%	0.175	43%	0.431	C	S	.	.			trans	-115	11.7	-176.7	-60.8	0	0	0	0	113.1	C27 Q28 T54 T55	C27-S57 CarbonylContact C-O 3.51Å; C27-S57 WeakPolarHBondContact CA-O 3.48Å; Q28-S57 PolarHBondContact N-O 3.02Å; T54-S57 WeakPolarHBondContact CG2-OG 3.33Å; T55-S57 PolarHBondContact O-N 3.14Å; T55-S57 VanDerWaalsContact O-N 3.1Å; T55-S57 PolarHBondContact O-OG 3.1Å
58	M	84.8	Confident	83.7	Confident	16 Å²	16	77.9 Å²	77.9	8%	0.079	42%	0.421	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-96.6	127.9	179.7	-83.9	153.6	115.8	0	0	109.6	F25 T34 P46 C49	F25-M58 HydrophobicContact CB-CB 4.28Å; F25-M58 HydrophobicContact CB-CE 4.47Å; F25-M58 HydrophobicContact CD1-CB 4.36Å; T34-M58 HydrophobicContact CG2-CE 4.31Å; T34-M58 WeakPolarHBondContact OG1-CE 3.16Å; P46-M58 HydrophobicContact CB-CE 3.81Å; P46-M58 HydrophobicContact CB-SD 3.81Å; P46-M58 HydrophobicContact CG-CE 3.2Å; P46-M58 HydrophobicContact CG-SD 3.46Å; P46-M58 WeakPolarHBondContact CG-SD 3.36Å; C49-M58 HydrophobicContact CB-SD 4.48Å
59	A	84.1	Confident	83.8	Confident	30 Å²	30	79.2 Å²	79.2	25%	0.248	43%	0.425	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-114.5	138.5	178.6	0	0	0	0	0	109.5	F25 Q26 Q28	F25-A59 CarbonylContact C-O 3.58Å; F25-A59 VanDerWaalsContact CA-O 3.32Å; F25-A59 WeakPolarHBondContact CA-O 3.37Å; Q26-A59 PolarHBondContact N-O 3.37Å; Q26-A59 PolarHBondContact O-N 3.2Å; Q28-A59 HydrophobicContact CG-CB 4.18Å
60	L	86.2	Confident	83.7	Confident	95 Å²	95	85.6 Å²	85.6	50%	0.497	46%	0.459	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-69	134.3	172.5	-168.8	89.9	0	0	0	109.9	A23 F24 F25	A23-L60 HydrophobicContact CB-CD1 3.77Å; F24-L60 WeakPolarHBondContact O-CA 3.11Å; F25-L60 HydrophobicContact CE1-CB 4.34Å; F25-L60 HydrophobicContact CE1-CD1 4.01Å; F25-L60 HydrophobicContact CE2-CD1 4.32Å; F25-L60 HydrophobicContact CZ-CD1 3.91Å
61	I	80.9	Confident	83.9	Confident	147 Å²	147	83.5 Å²	83.5	75%	0.754	44%	0.441	S	S	*	.			trans	-113.2	0	172.4	-59.4	-170.5	0	0	0	110	F24 Q26	F24-I61 PolarHBondContact O-N 2.9Å; Q26-I61 HydrophobicContact CB-CD1 3.37Å; Q26-I61 HydrophobicContact CB-CG1 4Å; Q26-I61 HydrophobicContact CG-CD1 4.06Å

Retrieved 61 of 61 residues in 10.6 ms (Link to these results)

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