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Anaphase-promoting complex subunit 13

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. The APC/C complex catalyzes assembly of branched 'Lys-11'-/'Lys-48'-linked branched ubiquitin chains on target proteins.

AlphaFold DB , UniProt , Accession U3ICR0, Species ANAPP (Anas platyrhynchos platyrhynchos, Northern mallard), Gene ANAPC13, Length 74 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M75.1Confident90.9Very high197 Ų197133.1 Ų133.197%0.9768%0.68SS**  0117.20-154.6132.379.600105.6S3 E4M1-S3 PolarHBondContact O-N 3.09Å; M1-S3 VanDerWaalsContact O-N 3.14Å; M1-E4 PolarHBondContact O-N 2.91Å
2D86.5Confident91.2Very high175 Ų175130.6 Ų130.694%0.93667%0.668SS**THydrogen-bonded Turntrans-74.8-4.5-166.6-53.8-27.7000113.4E4D2-E4 VanDerWaalsContact C-N 3.33Å
3S92.6Very high91.5Very high106 Ų106132 Ų13274%0.74168%0.678SS**THydrogen-bonded Turntrans-76.3-15174.858.10000114.1M1M1-S3 PolarHBondContact O-N 3.09Å; M1-S3 VanDerWaalsContact O-N 3.14Å
4E91.6Very high92Very high124 Ų124130.8 Ų130.858%0.57967%0.673SS**SBendtrans-115.1123.4-178.8-173.6157.9-15400111.9M1 D2 Q6M1-E4 PolarHBondContact O-N 2.91Å; D2-E4 VanDerWaalsContact C-N 3.33Å; E4-Q6 PolarHBondContact O-N 3.09Å
5V91.8Very high92.2Very high106 Ų106125.9 Ų125.964%0.64265%0.648SS**PPolyproline II helixtrans-72.6125.5175.465.90000110.1R7V5-R7 PolarHBondContact O-N 3.47Å
6Q91.8Very high92.5Very high166 Ų166124.1 Ų124.178%0.77664%0.639SS**PPolyproline II helixtrans-70.4122.6171.3-62.5-61.9-56.500108.9E4E4-Q6 PolarHBondContact O-N 3.09Å
7R90.5Very high92.8Very high164 Ų164124.2 Ų124.262%0.61964%0.641SS**PPolyproline II helixtrans-89.7143.4176.3-64.5178177.584.1-2109.6V5 G9 L12V5-R7 PolarHBondContact O-N 3.47Å; R7-G9 PolarHBondContact O-N 3.15Å; R7-L12 HydrophobicContact CB-CD1 4.07Å
8D95.4Very high93.1Very high100 Ų100121.2 Ų121.254%0.53564%0.638SS.*  trans-72.8113.2175-173.7-16.8000110.1R10 I11 L12D8-R10 PolarHBondContact O-N 3.35Å; D8-R10 WeakPolarHBondContact OD1-CB 3.09Å; D8-R10 PolarHBondContact OD1-N 3.39Å; D8-I11 HydrophobicContact CB-CB 4.17Å; D8-I11 HydrophobicContact CB-CG1 3.79Å; D8-I11 PolarHBondContact O-N 3.29Å; D8-I11 VanDerWaalsContact O-N 3.12Å; D8-L12 PolarHBondContact O-N 3.04Å; D8-L12 VanDerWaalsContact O-N 3.16Å
9G93.6Very high93.3Very high51 Ų51123.7 Ų123.753%0.52664%0.638SS.*Hα-helixtrans-61.1-30.1-179.500000113.7R7 I11 L12 D13R7-G9 PolarHBondContact O-N 3.15Å; G9-I11 VanDerWaalsContact C-N 3.34Å; G9-L12 PolarHBondContact O-N 3.09Å; G9-D13 PolarHBondContact O-N 3.03Å; G9-D13 VanDerWaalsContact O-N 3.12Å
10R95.9Very high93.4Very high190 Ų190126.4 Ų126.472%0.71764%0.64SS**Hα-helixtrans-68.2-36.7176-179.6-179.8176.3-178.9-1.1111.4D8 D13 L14D8-R10 PolarHBondContact O-N 3.35Å; D8-R10 WeakPolarHBondContact OD1-CB 3.09Å; D8-R10 PolarHBondContact OD1-N 3.39Å; R10-D13 PolarHBondContact O-N 3.04Å; R10-L14 HydrophobicContact CG-CD1 4.23Å; R10-L14 WeakPolarHBondContact O-CG 3.41Å; R10-L14 PolarHBondContact O-N 3.48Å
11I95.5Very high93.6Very high85 Ų85126.6 Ų126.644%0.43664%0.638SS.*Hα-helixtrans-69.3-39.2177.4-60-60.8000110.1D8 G9 D13 L14 I15D8-I11 HydrophobicContact CB-CB 4.17Å; D8-I11 HydrophobicContact CB-CG1 3.79Å; D8-I11 PolarHBondContact O-N 3.29Å; D8-I11 VanDerWaalsContact O-N 3.12Å; G9-I11 VanDerWaalsContact C-N 3.34Å; I11-D13 VanDerWaalsContact C-N 3.29Å; I11-D13 PolarHBondContact O-N 3.44Å; I11-L14 PolarHBondContact O-N 3.46Å; I11-I15 HydrophobicContact CG2-CD1 3.56Å; I11-I15 HydrophobicContact CG2-CG1 4.34Å; I11-I15 WeakPolarHBondContact O-CG1 3.23Å; I11-I15 PolarHBondContact O-N 2.89Å
12L94Very high94.7Very high103 Ų103122.5 Ų122.554%0.53962%0.62SS.*Hα-helixtrans-64.8-30.6175.9-66.2179.7000113.5R7 D8 G9R7-L12 HydrophobicContact CB-CD1 4.07Å; D8-L12 PolarHBondContact O-N 3.04Å; D8-L12 VanDerWaalsContact O-N 3.16Å; G9-L12 PolarHBondContact O-N 3.09Å
13D95.8Very high95.2Very high149 Ų149122.5 Ų122.580%0.79761%0.612SS**Hα-helixtrans-78.9-22.4177.9-164.946.6000112.9G9 R10 I11G9-D13 PolarHBondContact O-N 3.03Å; G9-D13 VanDerWaalsContact O-N 3.12Å; R10-D13 PolarHBondContact O-N 3.04Å; I11-D13 VanDerWaalsContact C-N 3.29Å; I11-D13 PolarHBondContact O-N 3.44Å
14L97.4Very high95.4Very high115 Ų115124.8 Ų124.860%0.60262%0.615SS**Hα-helixtrans-87.5-28.1179.6-74.3170.5000113.7R10 I11R10-L14 HydrophobicContact CG-CD1 4.23Å; R10-L14 WeakPolarHBondContact O-CG 3.41Å; R10-L14 PolarHBondContact O-N 3.48Å; I11-L14 PolarHBondContact O-N 3.46Å
15I96Very high95.7Very high58 Ų58123.3 Ų123.330%0.29762%0.616SS.*  trans-88.7118.5-176.8-61.3168.6000108.8I11 W19 R20I11-I15 HydrophobicContact CG2-CD1 3.56Å; I11-I15 HydrophobicContact CG2-CG1 4.34Å; I11-I15 WeakPolarHBondContact O-CG1 3.23Å; I11-I15 PolarHBondContact O-N 2.89Å; I15-W19 HydrophobicContact CB-CE3 4.14Å; I15-W19 HydrophobicContact CG1-CE3 3.78Å; I15-W19 HydrophobicContact CG1-CH2 4.4Å; I15-W19 HydrophobicContact CG1-CZ3 3.69Å; I15-W19 HydrophobicContact CG2-CB 4.28Å; I15-W19 HydrophobicContact CG2-CD2 4.26Å; I15-W19 HydrophobicContact CG2-CE3 3.99Å; I15-W19 HydrophobicContact CG2-CG 4.42Å; I15-R20 HydrophobicContact CG2-CB 4.02Å
16D96.8Very high95.9Very high96 Ų96129.4 Ų129.451%0.51363%0.63SS.*  trans-80.7167.1172.568.94.8000112.2A18 W19 R20D16-A18 PolarHBondContact O-N 2.99Å; D16-A18 PolarHBondContact OD1-N 3.48Å; D16-W19 PolarHBondContact O-N 3.21Å; D16-W19 WeakPolarHBondContact OD1-CB 3.47Å; D16-W19 PolarHBondContact OD1-N 3.3Å; D16-R20 WeakPolarHBondContact O-CB 3.44Å; D16-R20 PolarHBondContact O-N 3.5Å
17D97.1Very high96.1Very high126 Ų126129.2 Ų129.267%0.67463%0.629SS**Hα-helixtrans-63.3-29.2-178.8-68.4-31.3000112.1E21D17-E21 WeakPolarHBondContact O-CG 3.42Å; D17-E21 PolarHBondContact O-N 3.48Å
18A97.6Very high96.4Very high71 Ų71129 Ų12959%0.58764%0.64SS**Hα-helixtrans-67.1-48.4178.600000111.5D16 R20 E21 D22D16-A18 PolarHBondContact O-N 2.99Å; D16-A18 PolarHBondContact OD1-N 3.48Å; A18-R20 VanDerWaalsContact C-N 3.34Å; A18-E21 PolarHBondContact O-N 3.42Å; A18-D22 PolarHBondContact O-N 3.03Å; A18-D22 VanDerWaalsContact O-N 3.11Å
19W96.9Very high96.3Very high169 Ų169129.8 Ų129.864%0.6465%0.648SS**Hα-helixtrans-68.9-35.3177.5-175.619.7000111.9I15 D16 E21 D22I15-W19 HydrophobicContact CB-CE3 4.14Å; I15-W19 HydrophobicContact CG1-CE3 3.78Å; I15-W19 HydrophobicContact CG1-CH2 4.4Å; I15-W19 HydrophobicContact CG1-CZ3 3.69Å; I15-W19 HydrophobicContact CG2-CB 4.28Å; I15-W19 HydrophobicContact CG2-CD2 4.26Å; I15-W19 HydrophobicContact CG2-CE3 3.99Å; I15-W19 HydrophobicContact CG2-CG 4.42Å; D16-W19 PolarHBondContact O-N 3.21Å; D16-W19 WeakPolarHBondContact OD1-CB 3.47Å; D16-W19 PolarHBondContact OD1-N 3.3Å; W19-E21 VanDerWaalsContact C-N 3.29Å; W19-E21 PolarHBondContact O-N 3.26Å; W19-D22 WeakPolarHBondContact O-CB 3.38Å; W19-D22 PolarHBondContact O-N 3.37Å
20R95.8Very high96.5Very high177 Ų177132 Ų13267%0.66866%0.661SS**Hα-helixtrans-61.4-37.2177.4-175.7175.8177.9-179.2-1.9113.1I15 D16 A18I15-R20 HydrophobicContact CG2-CB 4.02Å; D16-R20 WeakPolarHBondContact O-CB 3.44Å; D16-R20 PolarHBondContact O-N 3.5Å; A18-R20 VanDerWaalsContact C-N 3.34Å
21E97.8Very high96.4Very high131 Ų131127.3 Ų127.361%0.61265%0.649SS**Hα-helixtrans-94.9-3.6-178.6-61.1-58.2141.700113.3D17 A18 W19D17-E21 WeakPolarHBondContact O-CG 3.42Å; D17-E21 PolarHBondContact O-N 3.48Å; A18-E21 PolarHBondContact O-N 3.42Å; W19-E21 VanDerWaalsContact C-N 3.29Å; W19-E21 PolarHBondContact O-N 3.26Å
22D97.5Very high96.4Very high111 Ų111127.2 Ų127.259%0.59466%0.655SS**  trans-64.1140-179.1-171.848.9000111.9A18 W19A18-D22 PolarHBondContact O-N 3.03Å; A18-D22 VanDerWaalsContact O-N 3.11Å; W19-D22 WeakPolarHBondContact O-CB 3.38Å; W19-D22 PolarHBondContact O-N 3.37Å
23K97.6Very high96.2Very high174 Ų174128.1 Ų128.176%0.75766%0.659SS**  trans-135130.4179.6-65.5-178.5-174.3179.10109.1
24L96.8Very high96.1Very high155 Ų155125.8 Ų125.881%0.81265%0.647SS**PPolyproline II helixtrans-61.3143.5172.5-65.5176.5000110.4
25P97.1Very high95.8Very high93 Ų93124.9 Ų124.960%0.60464%0.639SS**PPolyproline II helixtrans-66161.1174.129.5-35000111.2
26Y96.5Very high95.6Very high234 Ų234125.9 Ų125.992%0.91865%0.645SS**PPolyproline II helixtrans-77.6121.2166.8-67.3-78.3000108.7
27E96.6Very high95.3Very high162 Ų162124.6 Ų124.676%0.75764%0.642SS**PPolyproline II helixtrans-91.8144.3173.5-70.2-66.4159.700110.2
28D96.4Very high94.8Very high160 Ų160122.9 Ų122.986%0.85663%0.63SS**PPolyproline II helixtrans-79.1149.3177.3-69.9-36.1000111.5
29V94.6Very high93.9Very high116 Ų116125.1 Ų125.170%0.70364%0.638SS**PPolyproline II helixtrans-84.4134.6174.1-177.30000109.3I31V29-I31 HydrophobicContact CB-CD1 4.01Å; V29-I31 HydrophobicContact CG1-CD1 3.89Å; V29-I31 WeakPolarHBondContact O-CG1 2.93Å; V29-I31 PolarHBondContact O-N 3.11Å; V29-I31 VanDerWaalsContact O-N 3.11Å
30A96.1Very high92.6Very high98 Ų98125 Ų12581%0.8165%0.645SS**  trans-68.2108.2171.700000110.3
31I94.4Very high91.2Very high90 Ų90120 Ų12046%0.46263%0.629SS.*  trans-97.5131.5-178.5-52.5-56.7000110.5V29 L33 L36V29-I31 HydrophobicContact CB-CD1 4.01Å; V29-I31 HydrophobicContact CG1-CD1 3.89Å; V29-I31 WeakPolarHBondContact O-CG1 2.93Å; V29-I31 PolarHBondContact O-N 3.11Å; V29-I31 VanDerWaalsContact O-N 3.11Å; I31-L33 VanDerWaalsContact C-N 3.35Å; I31-L33 PolarHBondContact O-N 3.06Å; I31-L36 HydrophobicContact CG2-CD1 3.68Å; I31-L36 HydrophobicContact CG2-CD2 4.39Å; I31-L36 HydrophobicContact CG2-CG 4.12Å
32P94.9Very high89.3Confident84 Ų84121.6 Ų121.655%0.54564%0.642SS.*  trans-73.888.5172.131.2-34.3000109.9N34 E35P32-N34 PolarHBondContact O-N 2.8Å; P32-N34 VanDerWaalsContact O-N 3.08Å; P32-E35 HydrophobicContact CB-CB 4.43Å; P32-E35 HydrophobicContact CB-CG 4Å; P32-E35 HydrophobicContact CG-CB 4.26Å; P32-E35 HydrophobicContact CG-CG 4.13Å; P32-E35 WeakPolarHBondContact O-CB 3.38Å; P32-E35 PolarHBondContact O-N 2.95Å
33L91.4Very high87.3Confident121 Ų121124.1 Ų124.163%0.63466%0.655SS**G310 helixtrans-54.5-32-174.7-63.8177.7000113.5I31 E35 L36I31-L33 VanDerWaalsContact C-N 3.35Å; I31-L33 PolarHBondContact O-N 3.06Å; L33-E35 PolarHBondContact O-N 3.24Å; L33-L36 HydrophobicContact CD2-CD1 4.19Å; L33-L36 WeakPolarHBondContact O-CB 3.39Å; L33-L36 PolarHBondContact O-N 2.57Å
34N92.2Very high85.3Confident100 Ų100119.5 Ų119.554%0.53566%0.657SS.*G310 helixtrans-66.5-20.6179.1-60.813.2000113.5P32 L36 S49 V50 K51P32-N34 PolarHBondContact O-N 2.8Å; P32-N34 VanDerWaalsContact O-N 3.08Å; N34-L36 VanDerWaalsContact C-N 3.34Å; N34-S49 WeakPolarHBondContact O-CB 3.43Å; N34-V50 PolarHBondContact O-N 2.85Å; N34-K51 HydrophobicContact CB-CB 4.25Å; N34-K51 WeakPolarHBondContact O-CB 3.36Å; N34-K51 PolarHBondContact O-N 3.11Å
35E92.6Very high83.4Confident96 Ų96113.8 Ų113.845%0.44964%0.635SS.*G310 helixtrans-89.8-3.2176-56.7-70.2165.700111.4P32 L33 S49 K51P32-E35 HydrophobicContact CB-CB 4.43Å; P32-E35 HydrophobicContact CB-CG 4Å; P32-E35 HydrophobicContact CG-CB 4.26Å; P32-E35 HydrophobicContact CG-CG 4.13Å; P32-E35 WeakPolarHBondContact O-CB 3.38Å; P32-E35 PolarHBondContact O-N 2.95Å; L33-E35 PolarHBondContact O-N 3.24Å; E35-S49 VanDerWaalsContact C-CB 3.42Å; E35-S49 WeakPolarHBondContact O-CB 3.45Å; E35-K51 WeakPolarHBondContact OE1-CD 3.45Å; E35-K51 IonicContact OE1-NZ 2.8Å; E35-K51 PolarHBondContact OE1-NZ 2.82Å
36L91.1Very high81.8Confident79 Ų79113 Ų11341%0.41463%0.629SS.*SBendtrans-95.3153174.8-60.1-173.9000111.2I31 L33 N34 S49 V50I31-L36 HydrophobicContact CG2-CD1 3.68Å; I31-L36 HydrophobicContact CG2-CD2 4.39Å; I31-L36 HydrophobicContact CG2-CG 4.12Å; L33-L36 HydrophobicContact CD2-CD1 4.19Å; L33-L36 WeakPolarHBondContact O-CB 3.39Å; L33-L36 PolarHBondContact O-N 2.57Å; N34-L36 VanDerWaalsContact C-N 3.34Å; L36-S49 WeakPolarHBondContact O-CA 3.2Å; L36-V50 PolarHBondContact O-N 2.94Å; L36-V50 VanDerWaalsContact O-N 3.1Å
37P89.9Confident80.9Confident69 Ų69108.6 Ų108.645%0.44863%0.627SS.*PPolyproline II helixtrans-66.8155.1167.8-17.831.3000112.5E48P37-E48 WeakPolarHBondContact CA-O 3.4Å
38E87.4Confident80.4Confident90 Ų90102.7 Ų102.742%0.42160%0.599SS.*PPolyproline II helixtrans-59.6131.1171.3-75.1-84.9152.400111.3E40 Q41 V50E38-E40 PolarHBondContact O-N 3.08Å; E38-Q41 HydrophobicContact CB-CG 3.84Å; E38-V50 HydrophobicContact CG-CG2 3.97Å
39P78.3Confident80.2Confident118 Ų11895.3 Ų95.377%0.76656%0.56SS**THydrogen-bonded Turntrans-72-27-177.526.2-32.4000114Q41P39-Q41 PolarHBondContact O-N 2.99Å
40E70.5Confident80Confident168 Ų16891.1 Ų91.179%0.78553%0.534SS*.THydrogen-bonded Turntrans-95.724.2-170.2-63.3-64.4148.200114E38 D42E38-E40 PolarHBondContact O-N 3.08Å; E40-D42 VanDerWaalsContact C-N 3.3Å; E40-D42 PolarHBondContact O-N 3Å
41Q65.6Low79.9Confident72 Ų7290.2 Ų90.234%0.33651%0.512SS..  trans-78.480.6177.5-58.3-140.3-21.100111.3E38 P39 N43 T46E38-Q41 HydrophobicContact CB-CG 3.84Å; P39-Q41 PolarHBondContact O-N 2.99Å; Q41-N43 PolarHBondContact O-N 3.25Å; Q41-T46 VanDerWaalsContact OE1-N 3.08Å
42D57.5Low79.9Confident163 Ų16390.4 Ų90.487%0.87251%0.511SS*.THydrogen-bonded Turntrans-57.4-11177.1-168.828.4000113.8E40E40-D42 VanDerWaalsContact C-N 3.3Å; E40-D42 PolarHBondContact O-N 3Å
43N55.4Low79.6Confident165 Ų16590.6 Ų90.688%0.88251%0.505SS*.THydrogen-bonded Turntrans-124.250.1-172.3-134.919.9000114Q41Q41-N43 PolarHBondContact O-N 3.25Å
44G55.5Low79.6Confident77 Ų7791.9 Ų91.979%0.79451%0.508SS*.THydrogen-bonded Turntrans69.155.6171.800000112.7
45G57.7Low79.8Confident34 Ų3493.9 Ų93.935%0.35152%0.516SS..  trans-52.5147.5-165.200000116.6T47G45-T47 PolarHBondContact O-N 3.24Å
46T62.5Low79.8Confident76 Ų7694.4 Ų94.447%0.46652%0.516SS..  trans-57.8133.4176.3-39.10000108.6Q41 E48Q41-T46 VanDerWaalsContact OE1-N 3.08Å; T46-E48 HydrophobicContact CG2-CB 3.63Å; T46-E48 PolarHBondContact O-N 3.46Å
47T78.1Confident80Confident143 Ų143101.4 Ų101.488%0.87754%0.537SS*.SBendtrans-70.822.9176.359.30000113.2G45G45-T47 PolarHBondContact O-N 3.24Å
48E87Confident80.1Confident38 Ų38103.9 Ų103.918%0.17855%0.552CS.*SBendtrans-108.6144.7-167.9-177.6175.8-135.400109.6P37 T46 E52 K56P37-E48 WeakPolarHBondContact CA-O 3.4Å; T46-E48 HydrophobicContact CG2-CB 3.63Å; T46-E48 PolarHBondContact O-N 3.46Å; E48-E52 HydrophobicContact CG-CB 3.31Å; E48-E52 HydrophobicContact CG-CG 4.26Å; E48-E52 WeakPolarHBondContact CG-OE2 3.41Å; E48-E52 WeakPolarHBondContact OE1-CB 3.47Å; E48-K56 WeakPolarHBondContact OE1-CE 3.37Å; E48-K56 IonicContact OE1-NZ 2.57Å; E48-K56 PolarHBondContact OE1-NZ 3.27Å; E48-K56 WeakPolarHBondContact OE2-CE 3.16Å; E48-K56 IonicContact OE2-NZ 2.72Å; E48-K56 PolarHBondContact OE2-NZ 3.13Å
49S91.6Very high80.4Confident5 Ų5104.2 Ų104.24%0.03556%0.556CS.*  trans-71155.6178650000112.3N34 E35 L36 K51 E52 Q53N34-S49 WeakPolarHBondContact O-CB 3.43Å; E35-S49 VanDerWaalsContact C-CB 3.42Å; E35-S49 WeakPolarHBondContact O-CB 3.45Å; L36-S49 WeakPolarHBondContact O-CA 3.2Å; S49-K51 PolarHBondContact O-N 3.01Å; S49-E52 WeakPolarHBondContact CB-OE2 3.42Å; S49-E52 PolarHBondContact N-OE2 3.1Å; S49-E52 PolarHBondContact O-N 3.36Å; S49-E52 VanDerWaalsContact O-N 3.13Å; S49-E52 WeakPolarHBondContact OG-CB 3.33Å; S49-E52 WeakPolarHBondContact OG-CG 3.47Å; S49-E52 PolarHBondContact OG-N 3.11Å; S49-E52 PolarHBondContact OG-OE2 2.76Å; S49-Q53 PolarHBondContact O-N 3.47Å
50V90.8Very high81Confident27 Ų27104.9 Ų104.916%0.16455%0.552CS.*Hα-helixtrans-51.1-45.2173.4174.30000110.9N34 L36 E38 E52 Q53 E54N34-V50 PolarHBondContact O-N 2.85Å; L36-V50 PolarHBondContact O-N 2.94Å; L36-V50 VanDerWaalsContact O-N 3.1Å; E38-V50 HydrophobicContact CG-CG2 3.97Å; V50-E52 PolarHBondContact O-N 2.87Å; V50-Q53 WeakPolarHBondContact O-CB 3.48Å; V50-Q53 PolarHBondContact O-N 3.45Å; V50-E54 WeakPolarHBondContact O-CG 3.21Å; V50-E54 PolarHBondContact O-N 2.72Å
51K93.9Very high81.9Confident79 Ų7998.8 Ų98.834%0.34353%0.531SS..Hα-helixtrans-59.9-43.8179.9177.5178.7167-171.40113N34 E35 S49 Q53 E54 M55N34-K51 HydrophobicContact CB-CB 4.25Å; N34-K51 WeakPolarHBondContact O-CB 3.36Å; N34-K51 PolarHBondContact O-N 3.11Å; E35-K51 WeakPolarHBondContact OE1-CD 3.45Å; E35-K51 IonicContact OE1-NZ 2.8Å; E35-K51 PolarHBondContact OE1-NZ 2.82Å; S49-K51 PolarHBondContact O-N 3.01Å; K51-Q53 VanDerWaalsContact C-N 3.34Å; K51-E54 PolarHBondContact O-N 3.27Å; K51-M55 HydrophobicContact CG-CE 3.88Å; K51-M55 WeakPolarHBondContact O-CG 3.37Å; K51-M55 PolarHBondContact O-N 3.39Å
52E93.3Very high83Confident94 Ų94100.4 Ų100.444%0.43954%0.541SS..Hα-helixtrans-67.5-37.3178.6-73.6164.6143.300111.2E48 S49 V50 M55E48-E52 HydrophobicContact CG-CB 3.31Å; E48-E52 HydrophobicContact CG-CG 4.26Å; E48-E52 WeakPolarHBondContact CG-OE2 3.41Å; E48-E52 WeakPolarHBondContact OE1-CB 3.47Å; S49-E52 WeakPolarHBondContact CB-OE2 3.42Å; S49-E52 PolarHBondContact N-OE2 3.1Å; S49-E52 PolarHBondContact O-N 3.36Å; S49-E52 VanDerWaalsContact O-N 3.13Å; S49-E52 WeakPolarHBondContact OG-CB 3.33Å; S49-E52 WeakPolarHBondContact OG-CG 3.47Å; S49-E52 PolarHBondContact OG-N 3.11Å; S49-E52 PolarHBondContact OG-OE2 2.76Å; V50-E52 PolarHBondContact O-N 2.87Å; E52-M55 PolarHBondContact O-N 3.17Å
53Q90.1Very high84.4Confident89 Ų8998.8 Ų98.842%0.41653%0.529SS..Hα-helixtrans-62.6-43.4175.7-171.5176.920.200112.2S49 V50 K51 M55 K56S49-Q53 PolarHBondContact O-N 3.47Å; V50-Q53 WeakPolarHBondContact O-CB 3.48Å; V50-Q53 PolarHBondContact O-N 3.45Å; K51-Q53 VanDerWaalsContact C-N 3.34Å; Q53-M55 PolarHBondContact O-N 3.23Å; Q53-K56 WeakPolarHBondContact O-CB 3.49Å; Q53-K56 PolarHBondContact O-N 3.46Å; Q53-K56 VanDerWaalsContact O-N 3.11Å
54E91.4Very high85.9Confident148 Ų14897.7 Ų97.769%0.69251%0.513SS*.Hα-helixtrans-63.5-26.4177.7-71.5178.2166.700113.3V50 K51 K56V50-E54 WeakPolarHBondContact O-CG 3.21Å; V50-E54 PolarHBondContact O-N 2.72Å; K51-E54 PolarHBondContact O-N 3.27Å; E54-K56 VanDerWaalsContact C-N 3.27Å; E54-K56 PolarHBondContact O-N 3.31Å
55M94.9Very high87.2Confident142 Ų14299.9 Ų99.970%0.751%0.506SS*.THydrogen-bonded Turntrans-79.2-8.5177.2-68.3-177.7-17600113.3K51 E52 Q53K51-M55 HydrophobicContact CG-CE 3.88Å; K51-M55 WeakPolarHBondContact O-CG 3.37Å; K51-M55 PolarHBondContact O-N 3.39Å; E52-M55 PolarHBondContact O-N 3.17Å; Q53-M55 PolarHBondContact O-N 3.23Å
56K93.1Very high87.7Confident107 Ų107106 Ų10647%0.46553%0.525SS..  trans-82.3132.7177.7-70.7178.7172.8171.40111.2E48 Q53 E54 T58E48-K56 WeakPolarHBondContact OE1-CE 3.37Å; E48-K56 IonicContact OE1-NZ 2.57Å; E48-K56 PolarHBondContact OE1-NZ 3.27Å; E48-K56 WeakPolarHBondContact OE2-CE 3.16Å; E48-K56 IonicContact OE2-NZ 2.72Å; E48-K56 PolarHBondContact OE2-NZ 3.13Å; Q53-K56 WeakPolarHBondContact O-CB 3.49Å; Q53-K56 PolarHBondContact O-N 3.46Å; Q53-K56 VanDerWaalsContact O-N 3.11Å; E54-K56 VanDerWaalsContact C-N 3.27Å; E54-K56 PolarHBondContact O-N 3.31Å; K56-T58 HydrophobicContact CB-CG2 4.25Å; K56-T58 PolarHBondContact O-N 3.28Å
57W95.2Very high87.7Confident225 Ų225110.2 Ų110.285%0.85254%0.539SS*.  trans-88.8106.3166.7-170.118.2000109.5
58T91.3Very high86.8Confident122 Ų122109.8 Ų109.875%0.74853%0.532SS*.  trans-99.5-6.2-176.554.90000113.7K56 L60K56-T58 HydrophobicContact CB-CG2 4.25Å; K56-T58 PolarHBondContact O-N 3.28Å; T58-L60 PolarHBondContact O-N 3.12Å
59D93.9Very high85.6Confident96 Ų96112.7 Ų112.751%0.51355%0.552SS.*  trans-80118.1179.2176.938.5000111.2A61D59-A61 PolarHBondContact OD1-N 3.4Å
60L92.3Very high84.3Confident132 Ų132117.1 Ų117.169%0.69158%0.58SS**  trans-103.91.2179.4-64.4175.1000112.6T58 L62T58-L60 PolarHBondContact O-N 3.12Å; L60-L62 HydrophobicContact CB-CD1 3.99Å; L60-L62 HydrophobicContact CB-CD2 4.36Å; L60-L62 HydrophobicContact CB-CG 3.7Å; L60-L62 HydrophobicContact CD1-CD1 3.99Å; L60-L62 PolarHBondContact O-N 3.45Å
61A89.8Confident83.1Confident41 Ų41121.9 Ų121.934%0.33961%0.612SS.*  trans53.623.8-177.400000115D59 Q63 Y64D59-A61 PolarHBondContact OD1-N 3.4Å; A61-Q63 PolarHBondContact O-N 3.39Å; A61-Q63 VanDerWaalsContact O-N 3.09Å; A61-Y64 HydrophobicContact CB-CD2 4Å; A61-Y64 HydrophobicContact CB-CE2 4.02Å; A61-Y64 VanDerWaalsContact O-CD2 3.23Å; A61-Y64 WeakPolarHBondContact O-CD2 3.32Å; A61-Y64 PolarHBondContact O-N 3.3Å
62L87.8Confident81.6Confident105 Ų105124.7 Ų124.755%0.5564%0.636SS.*THydrogen-bonded Turntrans-66.3-14.6-175.8-62.6174.5000113.6L60 Y64 L65L60-L62 HydrophobicContact CB-CD1 3.99Å; L60-L62 HydrophobicContact CB-CD2 4.36Å; L60-L62 HydrophobicContact CB-CG 3.7Å; L60-L62 HydrophobicContact CD1-CD1 3.99Å; L60-L62 PolarHBondContact O-N 3.45Å; L62-Y64 PolarHBondContact O-N 3.27Å; L62-Y64 VanDerWaalsContact O-N 3.15Å; L62-L65 HydrophobicContact CD2-CD1 3.66Å; L62-L65 WeakPolarHBondContact O-CB 3.33Å; L62-L65 PolarHBondContact O-N 3.16Å
63Q87.4Confident80.1Confident130 Ų130123.6 Ų123.661%0.60765%0.65SS**Hα-helixtrans-52.1-34174.462.1-176.952.500113.1A61 L65 H66A61-Q63 PolarHBondContact O-N 3.39Å; A61-Q63 VanDerWaalsContact O-N 3.09Å; Q63-L65 PolarHBondContact O-N 3.12Å; Q63-H66 PolarHBondContact O-N 2.93Å
64Y85.9Confident77.8Confident142 Ų142131.1 Ų131.156%0.55769%0.693SS**Hα-helixtrans-72.4-14.3-178.8-60-64.8000114.1A61 L62 N68A61-Y64 HydrophobicContact CB-CD2 4Å; A61-Y64 HydrophobicContact CB-CE2 4.02Å; A61-Y64 VanDerWaalsContact O-CD2 3.23Å; A61-Y64 WeakPolarHBondContact O-CD2 3.32Å; A61-Y64 PolarHBondContact O-N 3.3Å; L62-Y64 PolarHBondContact O-N 3.27Å; L62-Y64 VanDerWaalsContact O-N 3.15Å; Y64-N68 PolarHBondContact O-ND2 3.47Å; Y64-N68 VanDerWaalsContact O-ND2 3.09Å
65L83.7Confident77.1Confident123 Ų123130.3 Ų130.364%0.64469%0.693SS**Hα-helixtrans-77.7-29.5177.6-66171.8000112.2L62 Q63L62-L65 HydrophobicContact CD2-CD1 3.66Å; L62-L65 WeakPolarHBondContact O-CB 3.33Å; L62-L65 PolarHBondContact O-N 3.16Å; Q63-L65 PolarHBondContact O-N 3.12Å
66H68.1Low76.2Confident162 Ų162129.7 Ų129.775%0.7569%0.693SS**Hα-helixtrans-77.4-32-176.1-171.8-114000112.7Q63 N68Q63-H66 PolarHBondContact O-N 2.93Å; H66-N68 VanDerWaalsContact C-N 3.32Å; H66-N68 PolarHBondContact O-N 3.39Å
67E61.8Low75.2Confident164 Ų164130.9 Ų130.977%0.76671%0.706SS**THydrogen-bonded Turntrans-77.4-15.2-179.6-66-175.4162.400113.9
68N59.1Low74Confident135 Ų135125.4 Ų125.472%0.72270%0.697SS**THydrogen-bonded Turntrans-93.38.5179.8-82.5-60.5000114.2Y64 H66 P70Y64-N68 PolarHBondContact O-ND2 3.47Å; Y64-N68 VanDerWaalsContact O-ND2 3.09Å; H66-N68 VanDerWaalsContact C-N 3.32Å; H66-N68 PolarHBondContact O-N 3.39Å; N68-P70 WeakPolarHBondContact O-CD 3.42Å
69V63.2Low73Confident99 Ų99125.6 Ų125.660%0.669%0.694SS**  trans-82.8106.1172.2-177.10000107.9
70P64.1Low71.6Confident97 Ų97127.6 Ų127.663%0.6371%0.706SS**  trans-59139.7174.424.4-32.2000108.8N68 T72N68-P70 WeakPolarHBondContact O-CD 3.42Å; P70-T72 PolarHBondContact O-N 3.33Å
71P65.1Low70.1Confident128 Ų128127.3 Ų127.383%0.83171%0.707SS**  trans-58111.2173.823.2-30.7000107.8G73P71-G73 PolarHBondContact O-N 3.14Å; P71-G73 VanDerWaalsContact O-N 3.09Å
72T63.2Low68.6Low137 Ų137133.9 Ų133.984%0.8474%0.735SS**  trans-60.3115.316946.50000106.8P70P70-T72 PolarHBondContact O-N 3.33Å
73G60.9Low67Low72 Ų72136.3 Ų136.374%0.74275%0.751SS**  trans-63.8167.1-160.900000116.7P71P71-G73 PolarHBondContact O-N 3.14Å; P71-G73 VanDerWaalsContact O-N 3.09Å
74N41.2Very low65.1Low247 Ų247136.9 Ų136.9100%1.32176%0.764SS**  trans-127.50158.5-110.96.4000107.9

Retrieved 74 of 74 residues in 64.4 ms (Link to these results)