X6RCV0_HUMAN Loading...

NBPF member 3

AlphaFold DB , UniProt , Accession X6RCV0, Species HUMAN (Homo sapiens, Human), Gene NBPF3, Length 53 aa.

						>X6RCV0_HUMAN|X6RCV0|NBPF3
MPLTPTVQGFQWTLRGPDVETSPFGAPRAASHGVGRHQELRDPTGGKGSETAT
					

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(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	64.6	Low	69.4	Low	234 Å²	234	147 Å²	147	100%	1.153	82%	0.815	S	S	*	*				0	128.7	0	-66.1	179.4	169.7	0	0	107.5
2	P	67.6	Low	68.9	Low	127 Å²	127	148.1 Å²	148.1	83%	0.825	80%	0.798	S	S	*	*			trans	-78.3	128.2	179.8	31.4	-29.3	0	0	0	109.6	T4	P2-T4 PolarHBondContact O-N 2.89Å
3	L	71.9	Confident	68.9	Low	173 Å²	173	146 Å²	146	91%	0.906	79%	0.794	S	S	*	*			trans	-79.3	109.1	174.9	-76.2	146.5	0	0	0	108.4
4	T	74.1	Confident	68.3	Low	124 Å²	124	140.9 Å²	140.9	76%	0.761	77%	0.765	S	S	*	*			trans	-68.5	125.4	171.5	35.5	0	0	0	0	109.7	P2 T6	P2-T4 PolarHBondContact O-N 2.89Å; T4-T6 PolarHBondContact O-N 3.35Å
5	P	65.1	Low	68.3	Low	116 Å²	116	147.1 Å²	147.1	75%	0.753	77%	0.773	S	S	*	*			trans	-70.3	119	177.1	26.9	-31.5	0	0	0	110	V7	P5-V7 PolarHBondContact O-N 3.3Å
6	T	67.5	Low	67.9	Low	125 Å²	125	140.2 Å²	140.2	77%	0.767	75%	0.748	S	S	*	*			trans	-72.7	105	173.4	-60.9	0	0	0	0	109.1	T4 Q8	T4-T6 PolarHBondContact O-N 3.35Å; T6-Q8 HydrophobicContact CG2-CG 4.48Å; T6-Q8 PolarHBondContact O-N 2.93Å
7	V	70.4	Confident	67.1	Low	130 Å²	130	138.4 Å²	138.4	79%	0.788	75%	0.745	S	S	*	*			trans	-80	108.6	171.2	-178.9	0	0	0	0	108.2	P5 G9	P5-V7 PolarHBondContact O-N 3.3Å; V7-G9 PolarHBondContact O-N 3.4Å; V7-G9 VanDerWaalsContact O-N 3.15Å
8	Q	72.4	Confident	66.3	Low	182 Å²	182	135.6 Å²	135.6	85%	0.85	73%	0.73	S	S	*	*			trans	-76.1	99.7	171.1	-70.4	-178.5	-28.1	0	0	108.3	T6	T6-Q8 HydrophobicContact CG2-CG 4.48Å; T6-Q8 PolarHBondContact O-N 2.93Å
9	G	70.9	Confident	65.5	Low	57 Å²	57	132.3 Å²	132.3	59%	0.588	72%	0.715	S	S	*	*			trans	-62.6	138.6	178.3	0	0	0	0	0	111.7	V7	V7-G9 PolarHBondContact O-N 3.4Å; V7-G9 VanDerWaalsContact O-N 3.15Å
10	F	68.8	Low	64.8	Low	177 Å²	177	134.3 Å²	134.3	78%	0.776	72%	0.72	S	S	*	*			trans	-77	128.6	173	-175.8	-101.8	0	0	0	110	W12	F10-W12 HydrophobicContact CE1-CB 4.05Å
11	Q	69.8	Low	64.2	Low	172 Å²	172	133.1 Å²	133.1	80%	0.804	72%	0.717	S	S	*	*			trans	-105.8	125.7	177.4	-69.6	-70.3	-63.5	0	0	109.4
12	W	63.6	Low	63.5	Low	160 Å²	160	124.5 Å²	124.5	61%	0.606	68%	0.68	S	S	*	*			trans	-121.4	146	172.5	58.8	-85	0	0	0	110.3	F10 L14 P27	F10-W12 HydrophobicContact CE1-CB 4.05Å; W12-L14 HydrophobicContact CE3-CD2 4.36Å; W12-L14 HydrophobicContact CE3-CG 4Å; W12-L14 HydrophobicContact CH2-CD1 4.1Å; W12-L14 HydrophobicContact CH2-CG 4.34Å; W12-L14 HydrophobicContact CZ3-CD1 3.6Å; W12-L14 HydrophobicContact CZ3-CD2 3.73Å; W12-L14 HydrophobicContact CZ3-CG 3.37Å; W12-P27 HydrophobicContact CH2-CG 4.04Å
13	T	69	Low	63.2	Low	121 Å²	121	124.1 Å²	124.1	74%	0.742	68%	0.678	S	S	*	*			trans	-121	127.6	-179.7	-50.4	0	0	0	0	109.2
14	L	60.7	Low	62.7	Low	75 Å²	75	126.1 Å²	126.1	39%	0.393	68%	0.68	S	S	.	*			trans	-74.7	136.8	169.9	-73.2	161.5	0	0	0	110	W12 V19 P27	W12-L14 HydrophobicContact CE3-CD2 4.36Å; W12-L14 HydrophobicContact CE3-CG 4Å; W12-L14 HydrophobicContact CH2-CD1 4.1Å; W12-L14 HydrophobicContact CH2-CG 4.34Å; W12-L14 HydrophobicContact CZ3-CD1 3.6Å; W12-L14 HydrophobicContact CZ3-CD2 3.73Å; W12-L14 HydrophobicContact CZ3-CG 3.37Å; L14-V19 HydrophobicContact CB-CG2 4.33Å; L14-V19 WeakPolarHBondContact O-CG2 3.41Å; L14-P27 HydrophobicContact CD1-CB 3.26Å; L14-P27 HydrophobicContact CD1-CG 3.81Å
15	R	68.6	Low	61.8	Low	234 Å²	234	122 Å²	122	88%	0.883	66%	0.662	S	S	*	*			trans	-126.7	128.2	171.2	-65.4	-167.4	-176.5	-171.9	2.3	109.2
16	G	61.6	Low	61.4	Low	36 Å²	36	120.8 Å²	120.8	37%	0.371	66%	0.661	S	S	.	*	S	Bend	trans	136.8	179.4	178.8	0	0	0	0	0	112.6	D18 V19	G16-D18 PolarHBondContact O-N 3.27Å; G16-V19 VanDerWaalsContact O-CB 3.27Å; G16-V19 WeakPolarHBondContact O-CB 3.43Å; G16-V19 WeakPolarHBondContact O-CG2 3.37Å; G16-V19 PolarHBondContact O-N 3.13Å
17	P	53.4	Low	60.9	Low	109 Å²	109	118 Å²	118	71%	0.708	65%	0.645	S	S	*	*	G	3₁₀ helix	trans	-59.2	-14.3	-179.3	23.5	-33	0	0	0	114.2	V19 E20	P17-V19 PolarHBondContact O-N 2.65Å; P17-E20 PolarHBondContact O-N 3.19Å
18	D	52.8	Low	60.2	Low	89 Å²	89	122.1 Å²	122.1	48%	0.476	65%	0.647	S	S	.	*	G	3₁₀ helix	trans	-62.5	-13.8	167.1	-69.9	-73.8	0	0	0	114.2	G16	G16-D18 PolarHBondContact O-N 3.27Å
19	V	52.3	Low	59.6	Low	73 Å²	73	117.1 Å²	117.1	44%	0.442	64%	0.637	S	S	.	*	G	3₁₀ helix	trans	-80.2	-35	173.5	171	0	0	0	0	111.7	L14 G16 P17 T21 S22	L14-V19 HydrophobicContact CB-CG2 4.33Å; L14-V19 WeakPolarHBondContact O-CG2 3.41Å; G16-V19 VanDerWaalsContact O-CB 3.27Å; G16-V19 WeakPolarHBondContact O-CB 3.43Å; G16-V19 WeakPolarHBondContact O-CG2 3.37Å; G16-V19 PolarHBondContact O-N 3.13Å; P17-V19 PolarHBondContact O-N 2.65Å; V19-T21 PolarHBondContact O-N 3.34Å; V19-T21 VanDerWaalsContact O-N 3.13Å; V19-S22 PolarHBondContact O-N 2.74Å
20	E	51.9	Low	58.9	Low	172 Å²	172	118.4 Å²	118.4	80%	0.804	64%	0.641	S	S	*	*	T	Hydrogen-bonded Turn	trans	-71.9	-10.1	-168.2	-72	-80.7	108.5	0	0	113.6	P17	P17-E20 PolarHBondContact O-N 3.19Å
21	T	52.2	Low	58.3	Low	109 Å²	109	115.1 Å²	115.1	67%	0.669	64%	0.64	S	S	*	*	T	Hydrogen-bonded Turn	trans	-105.5	10.8	-179.9	71.1	0	0	0	0	114.2	V19 P23	V19-T21 PolarHBondContact O-N 3.34Å; V19-T21 VanDerWaalsContact O-N 3.13Å; T21-P23 WeakPolarHBondContact O-CD 3.27Å
22	S	49.7	Very low	57.8	Low	54 Å²	54	115.5 Å²	115.5	38%	0.378	64%	0.642	S	S	.	*			trans	-114.3	105.8	-175.4	-174.7	0	0	0	0	113	V19 F24 G25	V19-S22 PolarHBondContact O-N 2.74Å; S22-F24 PolarHBondContact O-N 3.17Å; S22-F24 PolarHBondContact OG-N 3.15Å; S22-G25 PolarHBondContact OG-N 3.35Å; S22-G25 PolarHBondContact OG-O 3.01Å
23	P	61	Low	57.3	Low	118 Å²	118	110.8 Å²	110.8	77%	0.766	64%	0.643	S	S	*	*	S	Bend	trans	-89.1	38.7	165.4	35.6	-31.9	0	0	0	111.2	T21	T21-P23 WeakPolarHBondContact O-CD 3.27Å
24	F	61.5	Low	56.8	Low	216 Å²	216	110.6 Å²	110.6	95%	0.947	64%	0.641	S	S	*	*	S	Bend	trans	86.4	24.8	-158.8	-59	-78.4	0	0	0	115.9	S22	S22-F24 PolarHBondContact O-N 3.17Å; S22-F24 PolarHBondContact OG-N 3.15Å
25	G	54	Low	56.6	Low	37 Å²	37	110.8 Å²	110.8	38%	0.381	66%	0.661	S	S	.	*			trans	-79.1	130.1	166.4	0	0	0	0	0	110.8	S22	S22-G25 PolarHBondContact OG-N 3.35Å; S22-G25 PolarHBondContact OG-O 3.01Å
26	A	57.9	Low	56.3	Low	90 Å²	90	107.9 Å²	107.9	74%	0.744	65%	0.651	S	S	*	*			trans	-44	133.5	171.1	0	0	0	0	0	109.3	R28	A26-R28 PolarHBondContact O-N 3.22Å
27	P	56.3	Low	56.1	Low	67 Å²	67	113.7 Å²	113.7	44%	0.435	67%	0.668	S	S	.	*			trans	-53.9	119.5	-178	21.2	-30	0	0	0	106.9	W12 L14 A29	W12-P27 HydrophobicContact CH2-CG 4.04Å; L14-P27 HydrophobicContact CD1-CB 3.26Å; L14-P27 HydrophobicContact CD1-CG 3.81Å; P27-A29 PolarHBondContact O-N 2.89Å
28	R	55.9	Low	56.5	Low	217 Å²	217	115.1 Å²	115.1	82%	0.819	67%	0.665	S	S	*	*			trans	-63.7	99.4	176	-174.2	174.2	-171.4	136.4	0.3	103.9	A26 A30	A26-R28 PolarHBondContact O-N 3.22Å; R28-A30 PolarHBondContact O-N 2.68Å
29	A	59.2	Low	56.7	Low	77 Å²	77	118.1 Å²	118.1	64%	0.636	68%	0.676	S	S	*	*			trans	-49.6	115.4	171.4	0	0	0	0	0	104.5	P27 S31	P27-A29 PolarHBondContact O-N 2.89Å; A29-S31 PolarHBondContact O-N 2.87Å
30	A	55.6	Low	57.2	Low	83 Å²	83	122.3 Å²	122.3	69%	0.686	70%	0.695	S	S	*	*			trans	-56.6	96.2	166.2	0	0	0	0	0	103.6	R28 H32	R28-A30 PolarHBondContact O-N 2.68Å; A30-H32 PolarHBondContact O-N 2.89Å
31	S	57.5	Low	57.7	Low	108 Å²	108	124.9 Å²	124.9	76%	0.755	70%	0.697	S	S	*	*			trans	-52.3	116.5	175.2	-61.8	0	0	0	0	103.4	A29 G33	A29-S31 PolarHBondContact O-N 2.87Å; S31-G33 PolarHBondContact O-N 3.22Å
32	H	59.8	Low	57.9	Low	180 Å²	180	125.1 Å²	125.1	83%	0.833	70%	0.695	S	S	*	*			trans	-71.1	64.8	170.8	-145.2	69.8	0	0	0	106.3	A30 V34	A30-H32 PolarHBondContact O-N 2.89Å; H32-V34 PolarHBondContact O-N 2.68Å
33	G	52.9	Low	58.4	Low	62 Å²	62	128.3 Å²	128.3	64%	0.639	71%	0.714	S	S	*	*			trans	-84.4	70.2	-177	0	0	0	0	0	108.2	S31 G35	S31-G33 PolarHBondContact O-N 3.22Å; G33-G35 PolarHBondContact O-N 3.03Å
34	V	57.9	Low	58.1	Low	116 Å²	116	128.8 Å²	128.8	70%	0.703	72%	0.715	S	S	*	*			trans	53.5	52.7	149.1	-167.5	0	0	0	0	114.1	H32 R36	H32-V34 PolarHBondContact O-N 2.68Å; V34-R36 PolarHBondContact O-N 3.01Å
35	G	55.8	Low	57.7	Low	79 Å²	79	122 Å²	122	81%	0.814	71%	0.706	S	S	*	*	S	Bend	trans	-76.7	57.8	157.2	0	0	0	0	0	111.2	G33	G33-G35 PolarHBondContact O-N 3.03Å
36	R	62.6	Low	57.7	Low	173 Å²	173	123.7 Å²	123.7	65%	0.653	72%	0.724	S	S	*	*			trans	167.3	101.5	158	54.8	-153.5	-176.5	-161.2	0.7	106.6	V34 Q38	V34-R36 PolarHBondContact O-N 3.01Å; R36-Q38 PolarHBondContact O-N 2.74Å
37	H	58.2	Low	57.1	Low	158 Å²	158	129.4 Å²	129.4	73%	0.731	73%	0.732	S	S	*	*			trans	-59.2	80.6	143.5	-172.4	-103.7	0	0	0	106	E39	H37-E39 WeakPolarHBondContact CE1-CG 3.46Å; H37-E39 WeakPolarHBondContact ND1-CG 3.36Å; H37-E39 PolarHBondContact O-N 2.98Å
38	Q	60.4	Low	56.8	Low	139 Å²	139	130 Å²	130	65%	0.65	75%	0.749	S	S	*	*			trans	-62.7	101.8	154.3	-138.4	95.7	74.1	0	0	101.3	R36 L40	R36-Q38 PolarHBondContact O-N 2.74Å; Q38-L40 PolarHBondContact O-N 2.77Å
39	E	57.8	Low	56.2	Low	152 Å²	152	125 Å²	125	71%	0.71	75%	0.748	S	S	*	*			trans	-49.5	101.7	161.7	-86.5	179.3	129.6	0	0	105	H37 R41	H37-E39 WeakPolarHBondContact CE1-CG 3.46Å; H37-E39 WeakPolarHBondContact ND1-CG 3.36Å; H37-E39 PolarHBondContact O-N 2.98Å; E39-R41 PolarHBondContact O-N 2.83Å
40	L	62.5	Low	55.7	Low	161 Å²	161	130.5 Å²	130.5	84%	0.843	76%	0.76	S	S	*	*			trans	-66.1	93.8	164	-170	75.1	0	0	0	102.7	Q38 D42	Q38-L40 PolarHBondContact O-N 2.77Å; L40-D42 PolarHBondContact O-N 3.04Å
41	R	63.7	Low	55	Low	226 Å²	226	133.2 Å²	133.2	85%	0.853	77%	0.769	S	S	*	*			trans	-52.2	122.5	171.8	-97	-173.9	-179.5	168.3	0.7	105.8	E39 P43	E39-R41 PolarHBondContact O-N 2.83Å; R41-P43 WeakPolarHBondContact O-CD 3.09Å; R41-P43 VanDerWaalsContact O-N 3.15Å
42	D	56	Low	54.3	Low	114 Å²	114	132.3 Å²	132.3	61%	0.61	77%	0.768	S	S	*	*			trans	-49.6	121.4	176.7	-161.8	-57.8	0	0	0	108.3	L40 T44	L40-D42 PolarHBondContact O-N 3.04Å; D42-T44 PolarHBondContact O-N 2.91Å; D42-T44 WeakPolarHBondContact OD1-CB 3.5Å; D42-T44 PolarHBondContact OD1-N 2.6Å; D42-T44 PolarHBondContact OD1-OG1 3.05Å
43	P	59.2	Low	53.8	Low	121 Å²	121	134 Å²	134	79%	0.786	79%	0.791	S	S	*	*	T	Hydrogen-bonded Turn	trans	-68.7	-1.4	-180	28.1	-33.1	0	0	0	112.2	R41 G45	R41-P43 WeakPolarHBondContact O-CD 3.09Å; R41-P43 VanDerWaalsContact O-N 3.15Å; P43-G45 PolarHBondContact O-N 3.26Å
44	T	54.8	Low	53.8	Low	129 Å²	129	137.6 Å²	137.6	79%	0.791	80%	0.798	S	S	*	*	T	Hydrogen-bonded Turn	trans	-85.2	21.5	178	-32.1	0	0	0	0	113.3	D42	D42-T44 PolarHBondContact O-N 2.91Å; D42-T44 WeakPolarHBondContact OD1-CB 3.5Å; D42-T44 PolarHBondContact OD1-N 2.6Å; D42-T44 PolarHBondContact OD1-OG1 3.05Å
45	G	53.3	Low	53.6	Low	74 Å²	74	138.7 Å²	138.7	76%	0.763	80%	0.803	S	S	*	*	S	Bend	trans	-112.8	78.3	171.2	0	0	0	0	0	112.2	P43	P43-G45 PolarHBondContact O-N 3.26Å
46	G	53.6	Low	53.5	Low	72 Å²	72	142 Å²	142	74%	0.742	80%	0.803	S	S	*	*			trans	122.7	71.3	161.4	0	0	0	0	0	116.1
47	K	45.6	Very low	52.9	Low	210 Å²	210	140.2 Å²	140.2	91%	0.913	81%	0.812	S	S	*	*			trans	-99.1	111.4	140.1	-80.4	-166.3	177.3	-177.5	0	107.7	S49	K47-S49 PolarHBondContact O-N 3.48Å
48	G	50.9	Low	52.6	Low	78 Å²	78	139.1 Å²	139.1	80%	0.804	82%	0.817	S	S	*	*			trans	-57.2	134.5	161.3	0	0	0	0	0	109.5
49	S	42.8	Very low	52.1	Low	113 Å²	113	139.1 Å²	139.1	79%	0.79	83%	0.828	S	S	*	*			trans	-148.7	102.3	154.6	-66.5	0	0	0	0	106.3	K47	K47-S49 PolarHBondContact O-N 3.48Å
50	E	49.8	Very low	51.7	Low	192 Å²	192	138.1 Å²	138.1	90%	0.897	84%	0.836	S	S	*	*			trans	-33.7	135.5	163.1	-174.1	177.7	127.6	0	0	113.4
51	T	40	Very low	50.8	Low	141 Å²	141	136.4 Å²	136.4	87%	0.865	84%	0.836	S	S	*	*			trans	-152.2	125.8	149.2	6.9	0	0	0	0	109.3
52	A	43.4	Very low	49.8	Very low	89 Å²	89	128.9 Å²	128.9	74%	0.736	83%	0.834	S	S	*	*			trans	-62.3	148.6	-179	0	0	0	0	0	113.6
53	T	47.9	Very low	49.2	Very low	214 Å²	214	130.3 Å²	130.3	100%	1.313	86%	0.855	S	S	*	*			trans	-156.7	0	132.7	-63.4	0	0	0	0	108.2

Retrieved 53 of 53 residues in 11.4 ms (Link to these results)

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