X6RHZ2_HUMAN Loading...

GRAM domain containing 4

AlphaFold DB , UniProt , Accession X6RHZ2, Species HUMAN (Homo sapiens, Human), Gene GRAMD4, Length 33 aa.

						>X6RHZ2_HUMAN|X6RHZ2|GRAMD4
MLRRLDKIRFRGHKRDDFLDLAESPNASDTECS
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	66.2	Low	68.7	Low	214 Å²	214	171.5 Å²	171.5	100%	1.054	75%	0.752	S	S	*	*				0	103.7	0	-151	176.8	-179.1	0	0	108.1	R3	M1-R3 PolarHBondContact O-N 2.88Å
2	L	65	Low	68.4	Low	139 Å²	139	161.4 Å²	161.4	73%	0.728	73%	0.733	S	S	*	*			trans	-76.6	80.2	-167.2	-76	151.9	0	0	0	111.8	R4 L5	L2-R4 PolarHBondContact O-N 3.24Å; L2-L5 HydrophobicContact CB-CD1 3.74Å; L2-L5 HydrophobicContact CB-CD2 4.48Å; L2-L5 HydrophobicContact CB-CG 3.88Å; L2-L5 HydrophobicContact CD1-CD1 4.13Å
3	R	68	Low	67.8	Low	206 Å²	206	158 Å²	158	78%	0.777	72%	0.719	S	S	*	*	T	Hydrogen-bonded Turn	trans	-72.3	24.2	-172.7	-64.8	-172.2	-70.3	-101.4	1.9	116.5	M1	M1-R3 PolarHBondContact O-N 2.88Å
4	R	69.4	Low	67.4	Low	196 Å²	196	157.1 Å²	157.1	74%	0.74	71%	0.712	S	S	*	*	T	Hydrogen-bonded Turn	trans	-143.9	7.3	-176.2	-61.8	-170.6	-61.6	176.2	2.5	114.6	L2 D6 K7	L2-R4 PolarHBondContact O-N 3.24Å; R4-D6 PolarHBondContact O-N 3.18Å; R4-K7 PolarHBondContact O-N 3.34Å
5	L	68.2	Low	66.8	Low	93 Å²	93	160 Å²	160	49%	0.487	72%	0.715	S	S	.	*	G	3₁₀ helix	trans	-68.7	-22.9	179.2	-61.5	178.1	0	0	0	111.7	L2 K7 I8	L2-L5 HydrophobicContact CB-CD1 3.74Å; L2-L5 HydrophobicContact CB-CD2 4.48Å; L2-L5 HydrophobicContact CB-CG 3.88Å; L2-L5 HydrophobicContact CD1-CD1 4.13Å; L5-K7 PolarHBondContact O-N 2.93Å; L5-I8 HydrophobicContact CD2-CD1 3.86Å; L5-I8 WeakPolarHBondContact O-CB 3.49Å; L5-I8 PolarHBondContact O-N 2.98Å
6	D	67.1	Low	66.2	Low	132 Å²	132	157.4 Å²	157.4	71%	0.706	71%	0.71	S	S	*	*	G	3₁₀ helix	trans	-64.1	-17.7	175.6	-4.7	-53.8	0	0	0	112.9	R4	R4-D6 PolarHBondContact O-N 3.18Å
7	K	69.7	Low	65.6	Low	175 Å²	175	156.8 Å²	156.8	76%	0.761	72%	0.715	S	S	*	*	G	3₁₀ helix	trans	-82.2	-17.7	171.4	-66.8	-177.5	118	176.5	0	112.9	R4 L5 R9	R4-K7 PolarHBondContact O-N 3.34Å; L5-K7 PolarHBondContact O-N 2.93Å; K7-R9 PolarHBondContact O-N 2.92Å
8	I	76.3	Confident	65.3	Low	107 Å²	107	154.8 Å²	154.8	55%	0.549	70%	0.704	S	S	.	*			trans	-78.6	76	174.1	-50.7	175.5	0	0	0	107.1	L5 F10	L5-I8 HydrophobicContact CD2-CD1 3.86Å; L5-I8 WeakPolarHBondContact O-CB 3.49Å; L5-I8 PolarHBondContact O-N 2.98Å; I8-F10 HydrophobicContact CG2-CD2 4.41Å; I8-F10 PolarHBondContact O-N 2.65Å; I8-F10 HydrophobicContact CG2-CE2 4.23Å
9	R	72	Confident	64.9	Low	206 Å²	206	155.3 Å²	155.3	78%	0.777	71%	0.713	S	S	*	*			trans	-77.4	116.6	156.3	-61.2	-171.8	-60.9	147.1	-0.1	104.7	K7 R11	K7-R9 PolarHBondContact O-N 2.92Å; R9-R11 PolarHBondContact O-N 3.06Å
10	F	66.9	Low	64.7	Low	192 Å²	192	152 Å²	152	84%	0.842	70%	0.701	S	S	*	*			trans	-60.8	79.8	153	-71.9	-90.6	0	0	0	105	I8 G12	I8-F10 HydrophobicContact CG2-CD2 4.41Å; I8-F10 PolarHBondContact O-N 2.65Å; I8-F10 HydrophobicContact CG2-CE2 4.23Å; F10-G12 WeakPolarHBondContact O-CA 3.44Å; F10-G12 PolarHBondContact O-N 2.75Å
11	R	66.7	Low	64.3	Low	226 Å²	226	151.3 Å²	151.3	85%	0.853	70%	0.702	S	S	*	*			trans	-54.3	103	166.2	168	171.9	150.4	-177.9	-7.5	101.6	R9 H13	R9-R11 PolarHBondContact O-N 3.06Å; R11-H13 PolarHBondContact O-N 2.68Å
12	G	65.1	Low	63.9	Low	51 Å²	51	146 Å²	146	53%	0.526	69%	0.692	S	S	.	*			trans	-42.1	123.8	-163.1	0	0	0	0	0	106.4	F10 K14	F10-G12 WeakPolarHBondContact O-CA 3.44Å; F10-G12 PolarHBondContact O-N 2.75Å; G12-K14 PolarHBondContact O-N 3.44Å
13	H	60.5	Low	63.8	Low	117 Å²	117	147 Å²	147	54%	0.542	69%	0.693	S	S	.	*			trans	-59	94.1	160.6	-172.7	63	0	0	0	103.4	R11 R15 F18	R11-H13 PolarHBondContact O-N 2.68Å; H13-R15 PolarHBondContact O-N 2.91Å; H13-F18 AromaticContact NE2-CG 3.92Å; H13-F18 WeakPolarHBondContact NE2-CE2 3.27Å; H13-F18 AromaticContact NE2-CE2 3.04Å; H13-F18 AromaticContact CE1-CE2 3.27Å; H13-F18 WeakPolarHBondContact NE2-CD2 3.43Å; H13-F18 WeakPolarHBondContact CE1-CE2 3.04Å; H13-F18 WeakPolarHBondContact CE1-CD2 2.9Å; H13-F18 VanDerWaalsContact CE1-CD2 3.43Å; H13-F18 AromaticContact CE1-CD2 3.43Å; H13-F18 AromaticContact NE2-CD2 2.9Å
14	K	62.6	Low	63.3	Low	145 Å²	145	140.1 Å²	140.1	63%	0.63	68%	0.676	S	S	*	*			trans	-65.6	93.1	171.5	-82.6	-160.1	168.6	-165.2	0	101.7	G12 D16 D17	G12-K14 PolarHBondContact O-N 3.44Å; K14-D16 HydrophobicContact CB-CB 4.28Å; K14-D16 WeakPolarHBondContact CD-OD2 3.33Å; K14-D16 PolarHBondContact O-N 3.4Å; K14-D17 PolarHBondContact O-N 2.78Å; K14-D17 VanDerWaalsContact O-N 3.1Å
15	R	58	Low	62.7	Low	201 Å²	201	135.5 Å²	135.5	76%	0.758	67%	0.672	S	S	*	*	G	3₁₀ helix	trans	-56.2	-3.9	170.3	-73	180	166.2	128.8	-4.8	111.2	H13 D17 F18	H13-R15 PolarHBondContact O-N 2.91Å; R15-D17 PolarHBondContact O-N 3.1Å; R15-F18 PolarHBondContact O-N 3.05Å
16	D	57.1	Low	62.3	Low	118 Å²	118	138.7 Å²	138.7	63%	0.631	69%	0.689	S	S	*	*	G	3₁₀ helix	trans	-58.3	-29	167.4	-50.7	-42.9	0	0	0	112.9	K14	K14-D16 HydrophobicContact CB-CB 4.28Å; K14-D16 WeakPolarHBondContact CD-OD2 3.33Å; K14-D16 PolarHBondContact O-N 3.4Å
17	D	57.1	Low	62.1	Low	147 Å²	147	136.1 Å²	136.1	79%	0.786	69%	0.686	S	S	*	*	G	3₁₀ helix	trans	-89.3	-7	173	-65.7	-33.3	0	0	0	112.9	K14 R15 L19	K14-D17 PolarHBondContact O-N 2.78Å; K14-D17 VanDerWaalsContact O-N 3.1Å; R15-D17 PolarHBondContact O-N 3.1Å; D17-L19 PolarHBondContact O-N 2.97Å; D17-L19 VanDerWaalsContact O-N 3.11Å
18	F	59	Low	61.7	Low	121 Å²	121	132.8 Å²	132.8	53%	0.531	69%	0.685	S	S	.	*			trans	-86.2	65.1	167.1	-96.6	-103	0	0	0	109.1	H13 R15 D20	H13-F18 AromaticContact NE2-CG 3.92Å; H13-F18 WeakPolarHBondContact NE2-CE2 3.27Å; H13-F18 AromaticContact NE2-CE2 3.04Å; H13-F18 AromaticContact CE1-CE2 3.27Å; H13-F18 WeakPolarHBondContact NE2-CD2 3.43Å; H13-F18 WeakPolarHBondContact CE1-CE2 3.04Å; H13-F18 WeakPolarHBondContact CE1-CD2 2.9Å; H13-F18 VanDerWaalsContact CE1-CD2 3.43Å; H13-F18 AromaticContact CE1-CD2 3.43Å; H13-F18 AromaticContact NE2-CD2 2.9Å; R15-F18 PolarHBondContact O-N 3.05Å; F18-D20 PolarHBondContact O-N 3.11Å
19	L	57.4	Low	61.2	Low	165 Å²	165	134.8 Å²	134.8	86%	0.864	70%	0.697	S	S	*	*	T	Hydrogen-bonded Turn	trans	-73.2	35.8	159.8	-111.9	159.6	0	0	0	110.9	D17	D17-L19 PolarHBondContact O-N 2.97Å; D17-L19 VanDerWaalsContact O-N 3.11Å
20	D	60.9	Low	60.9	Low	89 Å²	89	131.4 Å²	131.4	48%	0.476	70%	0.699	S	S	.	*	T	Hydrogen-bonded Turn	trans	-142.8	22.5	180	-161.2	20.2	0	0	0	112	F18 E23	F18-D20 PolarHBondContact O-N 3.11Å; D20-E23 WeakPolarHBondContact OD1-CB 3.01Å
21	L	57.3	Low	60.8	Low	138 Å²	138	131 Å²	131	72%	0.723	70%	0.7	S	S	*	*	S	Bend	trans	-79.1	-8	161.6	-159	66.3	0	0	0	111.5
22	A	58.5	Low	60.4	Low	103 Å²	103	126.6 Å²	126.6	85%	0.851	70%	0.702	S	S	*	*	S	Bend	trans	-87.9	-14.9	174.2	0	0	0	0	0	113.2
23	E	61.3	Low	59.7	Low	160 Å²	160	132.7 Å²	132.7	75%	0.748	74%	0.737	S	S	*	*	S	Bend	trans	-118.2	14.3	177.7	-138.7	-172.4	144.2	0	0	113.8	D20 P25	D20-E23 WeakPolarHBondContact OD1-CB 3.01Å; E23-P25 VanDerWaalsContact O-CD 3.31Å; E23-P25 WeakPolarHBondContact O-CD 3.31Å
24	S	57.3	Low	59.7	Low	60 Å²	60	133.5 Å²	133.5	42%	0.42	75%	0.747	S	S	.	*	S	Bend	trans	-72.8	117.6	147.3	177.1	0	0	0	0	105.6	N26	S24-N26 PolarHBondContact O-N 2.89Å
25	P	57.2	Low	59.5	Low	99 Å²	99	132.9 Å²	132.9	64%	0.643	75%	0.753	S	S	*	*			trans	-56.1	115.4	168	-13.6	27.3	0	0	0	105.5	E23 A27	E23-P25 VanDerWaalsContact O-CD 3.31Å; E23-P25 WeakPolarHBondContact O-CD 3.31Å; P25-A27 PolarHBondContact O-N 2.79Å
26	N	60.5	Low	59.6	Low	161 Å²	161	129.1 Å²	129.1	86%	0.861	75%	0.752	S	S	*	*	S	Bend	trans	-65.1	17.8	172.5	-111.2	31.3	0	0	0	112.1	S24	S24-N26 PolarHBondContact O-N 2.89Å
27	A	62.2	Low	59.7	Low	77 Å²	77	129.8 Å²	129.8	64%	0.636	76%	0.76	S	S	*	*			trans	-112.9	60.9	179.9	0	0	0	0	0	109.1	P25 D29	P25-A27 PolarHBondContact O-N 2.79Å; A27-D29 PolarHBondContact O-N 3.33Å
28	S	62.6	Low	59.9	Low	106 Å²	106	128.7 Å²	128.7	74%	0.741	76%	0.758	S	S	*	*			trans	-86.8	42.1	161.7	-60.1	0	0	0	0	110.6
29	D	65.7	Low	60	Low	148 Å²	148	129.2 Å²	129.2	79%	0.791	77%	0.773	S	S	*	*			trans	-114.6	74.7	162.7	-76.7	-33.1	0	0	0	106.6	A27 E31	A27-D29 PolarHBondContact O-N 3.33Å; D29-E31 PolarHBondContact O-N 3.06Å
30	T	64.8	Low	60.2	Low	135 Å²	135	126.6 Å²	126.6	83%	0.828	77%	0.767	S	S	*	*			trans	-70	96.3	155.9	42.1	0	0	0	0	105.9	C32	T30-C32 PolarHBondContact O-N 3.03Å
31	E	64.9	Low	60.1	Low	185 Å²	185	129.5 Å²	129.5	86%	0.864	79%	0.789	S	S	*	*			trans	-47.4	117.4	164.4	-72.6	-168.9	101.9	0	0	107.7	D29 S33	D29-E31 PolarHBondContact O-N 3.06Å; E31-S33 PolarHBondContact O-N 3.02Å
32	C	59.4	Low	60.3	Low	132 Å²	132	128.8 Å²	128.8	89%	0.892	80%	0.795	S	S	*	*			trans	-62.4	104.8	171.2	-168.7	0	0	0	0	107.1	T30	T30-C32 PolarHBondContact O-N 3.03Å
33	S	49.8	Very low	60.5	Low	180 Å²	180	131.2 Å²	131.2	100%	1.259	79%	0.789	S	S	*	*			trans	-74	0	165.9	63.5	0	0	0	0	110.8	E31	E31-S33 PolarHBondContact O-N 3.02Å

Retrieved 33 of 33 residues in 7.4 ms (Link to these results)

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